Variant report

Variant	rs73490968
Chromosome Location	chr11:59662019-59662020
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs56807325	0.83[AMR][1000 genomes]
rs57018855	1.00[ASN][1000 genomes]
rs58599361	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs59180193	0.94[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs59287057	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61678206	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7120906	1.00[ASN][1000 genomes]
rs713136	1.00[ASN][1000 genomes]
rs73490907	0.83[AMR][1000 genomes]
rs73490959	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73490967	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59660000-59666400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:59660000-59667000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr11:59660000-59668800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
4	chr11:59661600-59662600	Enhancers	HMEC	breast
5	chr11:59661600-59662800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr11:59661800-59662400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr11:59661800-59662800	Enhancers	NHEK	skin
8	chr11:59662000-59662600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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