Variant report

Variant	rs73491456
Chromosome Location	chr11:76714931-76714932
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs1062170	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17135310	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17135319	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17160169	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2187498	1.00[EUR][1000 genomes]
rs4341568	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4597093	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57505872	1.00[EUR][1000 genomes]
rs57756929	1.00[EUR][1000 genomes]
rs58530046	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58566866	1.00[EUR][1000 genomes]
rs60982520	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6592673	1.00[EUR][1000 genomes]
rs6592681	1.00[EUR][1000 genomes]
rs6592695	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6592696	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7102199	1.00[EUR][1000 genomes]
rs7103881	1.00[EUR][1000 genomes]
rs7104807	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7105271	1.00[EUR][1000 genomes]
rs7105797	1.00[EUR][1000 genomes]
rs7106009	1.00[EUR][1000 genomes]
rs7106029	1.00[EUR][1000 genomes]
rs7113911	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7114082	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7114367	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7115053	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7118970	1.00[EUR][1000 genomes]
rs7119233	1.00[EUR][1000 genomes]
rs73489514	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73489576	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73489579	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73489582	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73489585	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73489594	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73491425	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73507813	1.00[EUR][1000 genomes]
rs73507817	1.00[EUR][1000 genomes]
rs73507826	1.00[EUR][1000 genomes]
rs73507833	1.00[EUR][1000 genomes]
rs7924330	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7932066	1.00[EUR][1000 genomes]
rs7932449	1.00[EUR][1000 genomes]
rs7933347	1.00[EUR][1000 genomes]
rs7943089	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7943364	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7943396	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7945781	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9704887	0.88[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9919623	0.80[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76675000-76721800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr11:76675000-76725600	Weak transcription	A549	lung
3	chr11:76675000-76729600	Weak transcription	Brain Angular Gyrus	brain
4	chr11:76683000-76736400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr11:76683200-76729200	Weak transcription	Brain Hippocampus Middle	brain
6	chr11:76683600-76720400	Weak transcription	Brain Cingulate Gyrus	brain
7	chr11:76683600-76728000	Weak transcription	Brain Anterior Caudate	brain
8	chr11:76689200-76734600	Weak transcription	Liver	Liver
9	chr11:76689600-76717800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr11:76689600-76737000	Weak transcription	Pancreas	Pancrea
11	chr11:76689800-76731400	Weak transcription	Ovary	ovary
12	chr11:76690000-76718000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr11:76690000-76718600	Weak transcription	Primary B cells from cord blood	blood
14	chr11:76690000-76722000	Weak transcription	Aorta	Aorta
15	chr11:76690000-76723800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
16	chr11:76690000-76735800	Weak transcription	Rectal Smooth Muscle	rectum
17	chr11:76690200-76722000	Weak transcription	Spleen	Spleen
18	chr11:76690200-76729000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr11:76690200-76736800	Weak transcription	Skeletal Muscle Male	skeletal muscle
20	chr11:76690400-76717200	Weak transcription	Primary hematopoietic stem cells	blood
21	chr11:76690400-76734600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
22	chr11:76693800-76734800	Strong transcription	Monocytes-CD14+_RO01746	blood
23	chr11:76694000-76738600	Weak transcription	HSMMtube	muscle
24	chr11:76696200-76738000	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr11:76696400-76726600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr11:76696600-76722200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr11:76696600-76725600	Weak transcription	Small Intestine	intestine
28	chr11:76696600-76726800	Weak transcription	Esophagus	oesophagus
29	chr11:76697000-76726600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr11:76698000-76726600	Weak transcription	NHDF-Ad	bronchial
31	chr11:76699800-76731200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
32	chr11:76700000-76729800	Weak transcription	Left Ventricle	heart
33	chr11:76701200-76738400	Weak transcription	Brain Inferior Temporal Lobe	brain
34	chr11:76702600-76736000	Weak transcription	Brain Substantia Nigra	brain
35	chr11:76703600-76717200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr11:76704200-76720200	Weak transcription	Rectal Mucosa Donor 29	rectum
37	chr11:76705200-76715000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr11:76705200-76718800	Weak transcription	Primary neutrophils fromperipheralblood	blood
39	chr11:76705400-76720200	Weak transcription	Lung	lung
40	chr11:76705600-76720000	Weak transcription	Fetal Stomach	stomach
41	chr11:76705600-76735600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
42	chr11:76707200-76730800	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr11:76707600-76730400	Weak transcription	Fetal Brain Male	brain
44	chr11:76709400-76720000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
45	chr11:76709600-76720000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr11:76709600-76732400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr11:76709600-76733200	Weak transcription	Fetal Lung	lung
48	chr11:76709800-76728000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
49	chr11:76709800-76731200	Weak transcription	HUES48 Cell Line	embryonic stem cell
50	chr11:76710800-76715200	Weak transcription	HMEC	breast

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