Variant report

Variant	rs73493111
Chromosome Location	chr11:59707292-59707293
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs59035014	1.00[AMR][1000 genomes]
rs66980105	1.00[AMR][1000 genomes]
rs73490905	1.00[AMR][1000 genomes]
rs73490909	1.00[AMR][1000 genomes]
rs73490914	1.00[AMR][1000 genomes]
rs73490917	1.00[AMR][1000 genomes]
rs73490921	1.00[AMR][1000 genomes]
rs73490963	1.00[AMR][1000 genomes]
rs73490970	1.00[AMR][1000 genomes]
rs73490973	1.00[AMR][1000 genomes]
rs73490976	1.00[AMR][1000 genomes]
rs73490979	1.00[AMR][1000 genomes]
rs73490984	1.00[AMR][1000 genomes]
rs73493107	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv334	chr11:59663800-59709104	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1045477	chr11:59664372-59714143	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59705800-59707400	Enhancers	K562	blood
2	chr11:59706200-59711400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links