Variant report

Variant	rs73501061
Chromosome Location	chr11:34129968-34129969
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:34125543..34130810-chr11:34377372..34382966,13	MCF-7	breast:
2	chr11:34071305..34076629-chr11:34124370..34130035,10	MCF-7	breast:
3	chr11:34070943..34077471-chr11:34125498..34130034,9	MCF-7	breast:

Variant related genes	Relation type
ENSG00000135387	Chromatin interaction
ENSG00000166016	Chromatin interaction

rs_ID	r²[population]
rs11605751	0.84[AFR][1000 genomes]
rs36006049	1.00[AFR][1000 genomes]
rs57975123	1.00[AFR][1000 genomes]
rs58487250	1.00[AFR][1000 genomes]
rs61596717	0.91[AFR][1000 genomes]
rs68136693	1.00[AFR][1000 genomes]
rs73486510	0.91[AFR][1000 genomes]
rs73486543	1.00[AFR][1000 genomes]
rs73497021	1.00[AFR][1000 genomes]
rs73497046	0.84[AFR][1000 genomes]
rs73497058	1.00[AFR][1000 genomes]
rs73497061	1.00[AFR][1000 genomes]
rs73499094	1.00[AFR][1000 genomes]
rs73500435	1.00[AFR][1000 genomes]
rs73500462	1.00[AFR][1000 genomes]
rs73500465	1.00[AFR][1000 genomes]
rs73500472	1.00[AFR][1000 genomes]
rs73500476	0.91[AFR][1000 genomes]
rs73500825	0.91[AFR][1000 genomes]
rs73500839	0.91[AFR][1000 genomes]
rs73500853	0.91[AFR][1000 genomes]
rs73500860	0.84[AFR][1000 genomes]
rs73501015	1.00[AFR][1000 genomes]
rs73501036	1.00[AFR][1000 genomes]
rs73501046	1.00[AFR][1000 genomes]
rs73501051	1.00[AFR][1000 genomes]
rs73501093	1.00[AFR][1000 genomes]
rs73501100	1.00[AFR][1000 genomes]

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:34127800-34131200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr11:34128000-34130000	Weak transcription	Aorta	Aorta
3	chr11:34128000-34131800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr11:34128000-34133200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr11:34128000-34168000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr11:34128200-34130000	Weak transcription	Colonic Mucosa	Colon
7	chr11:34128200-34131000	Weak transcription	Spleen	Spleen
8	chr11:34128200-34131200	Weak transcription	Gastric	stomach
9	chr11:34128200-34132800	Weak transcription	Fetal Brain Male	brain
10	chr11:34128200-34169800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr11:34128400-34130000	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr11:34128400-34130000	Weak transcription	Sigmoid Colon	Sigmoid Colon
13	chr11:34128400-34130200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:34128400-34130400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
15	chr11:34128400-34130400	Weak transcription	Rectal Smooth Muscle	rectum
16	chr11:34128400-34130600	Weak transcription	Fetal Kidney	kidney
17	chr11:34128400-34130800	Weak transcription	Primary neutrophils fromperipheralblood	blood
18	chr11:34128400-34131400	Weak transcription	Fetal Intestine Small	intestine
19	chr11:34128600-34130400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr11:34128600-34130400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
21	chr11:34128600-34130400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr11:34128600-34130600	Weak transcription	HSMMtube	muscle
23	chr11:34128600-34131000	Weak transcription	Fetal Lung	lung
24	chr11:34128600-34133200	Weak transcription	Fetal Heart	heart
25	chr11:34128600-34133400	Weak transcription	Pancreatic Islets	Pancreatic Islet
26	chr11:34128600-34173200	Strong transcription	iPS-20b Cell Line	embryonic stem cell
27	chr11:34128600-34176400	Strong transcription	Fetal Stomach	stomach
28	chr11:34128800-34130000	Weak transcription	A549	lung
29	chr11:34128800-34130000	Weak transcription	HUVEC	blood vessel
30	chr11:34128800-34130200	Weak transcription	NHLF	lung
31	chr11:34128800-34130600	Weak transcription	Brain Germinal Matrix	brain
32	chr11:34128800-34130800	Weak transcription	Esophagus	oesophagus
33	chr11:34128800-34130800	Weak transcription	Pancreas	Pancrea
34	chr11:34128800-34138800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr11:34128800-34163600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr11:34128800-34178000	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr11:34129000-34130000	Genic enhancers	Primary B cells from cord blood	blood
38	chr11:34129000-34130000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr11:34129000-34130000	Genic enhancers	Dnd41	blood
40	chr11:34129000-34130200	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
41	chr11:34129000-34130200	Genic enhancers	Primary T helper cells PMA-I stimulated	--
42	chr11:34129000-34131000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
43	chr11:34129000-34131400	Strong transcription	Psoas Muscle	Psoas
44	chr11:34129000-34133000	Weak transcription	Stomach Mucosa	stomach
45	chr11:34129000-34147200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
46	chr11:34129000-34150200	Strong transcription	HUES64 Cell Line	embryonic stem cell
47	chr11:34129000-34157200	Strong transcription	iPS-18 Cell Line	embryonic stem cell
48	chr11:34129000-34170000	Strong transcription	HUES6 Cell Line	embryonic stem cell
49	chr11:34129000-34177400	Strong transcription	Osteobl	bone
50	chr11:34129000-34177800	Strong transcription	HUES48 Cell Line	embryonic stem cell

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