Variant report

Variant	rs73537353
Chromosome Location	chr13:76734666-76734667
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs56659291	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73537338	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1054431	chr13:76460431-76885094	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv541837	chr13:76460431-76885094	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv900580	chr13:76665408-76735400	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1044736	chr13:76728655-77066435	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:76733600-76738400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr13:76734000-76736200	Enhancers	Fetal Stomach	stomach
3	chr13:76734200-76735000	Enhancers	Left Ventricle	heart
4	chr13:76734200-76735000	Weak transcription	HSMMtube	muscle
5	chr13:76734200-76735200	Enhancers	Aorta	Aorta
6	chr13:76734200-76735200	Enhancers	Rectal Smooth Muscle	rectum
7	chr13:76734200-76735200	Enhancers	Right Ventricle	heart
8	chr13:76734200-76735600	Enhancers	Psoas Muscle	Psoas
9	chr13:76734200-76736000	Enhancers	Fetal Muscle Leg	muscle
10	chr13:76734400-76735400	Weak transcription	Fetal Lung	lung
11	chr13:76734400-76735400	Enhancers	Stomach Smooth Muscle	stomach
12	chr13:76734400-76736000	Enhancers	Fetal Heart	heart
13	chr13:76734400-76736000	Enhancers	Fetal Muscle Trunk	muscle
14	chr13:76734400-76738600	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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