The 2.0 version of rSNPBase

Variant report

Variant rs73550507
Chromosome Location chr13:96331528-96331529
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96325600-96332400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr13:96327000-96331800 Active TSS GM12878-XiMat blood
3 chr13:96328000-96332000 Active TSS Breast Myoepithelial Primary Cells Breast
4 chr13:96328600-96331600 Active TSS Rectal Smooth Muscle rectum
5 chr13:96329600-96332400 Active TSS Right Atrium heart
6 chr13:96330000-96331600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
7 chr13:96330000-96331800 Flanking Active TSS Primary B cells from cord blood blood
8 chr13:96330200-96332000 Flanking Active TSS Dnd41 blood
9 chr13:96330200-96333200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
10 chr13:96330200-96340800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr13:96330400-96332200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr13:96330600-96331600 Enhancers Primary T cells fromperipheralblood blood
13 chr13:96330600-96331800 Enhancers Primary B cells from peripheral blood blood
14 chr13:96330600-96331800 Enhancers Small Intestine intestine
15 chr13:96330600-96331800 Active TSS Thymus Thymus
16 chr13:96330600-96332000 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr13:96330600-96332000 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr13:96330600-96332400 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr13:96330600-96336400 Weak transcription Gastric stomach
20 chr13:96330600-96336800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr13:96330600-96340800 Weak transcription Spleen Spleen
22 chr13:96330800-96331800 Enhancers Adipose Nuclei Adipose
23 chr13:96330800-96331800 Enhancers Fetal Thymus thymus
24 chr13:96330800-96331800 Enhancers Sigmoid Colon Sigmoid Colon
25 chr13:96330800-96332000 Enhancers Brain Anterior Caudate brain
26 chr13:96330800-96332400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
27 chr13:96330800-96332400 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr13:96330800-96333600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr13:96330800-96333800 Enhancers Primary monocytes fromperipheralblood blood
30 chr13:96330800-96334400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr13:96330800-96334400 Weak transcription Fetal Brain Female brain
32 chr13:96330800-96336000 Enhancers Primary T helper cells fromperipheralblood blood
33 chr13:96330800-96336800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr13:96330800-96337000 Weak transcription Lung lung
35 chr13:96331000-96331800 Flanking Active TSS NHLF lung
36 chr13:96331000-96333400 Enhancers Skeletal Muscle Male skeletal muscle
37 chr13:96331000-96336400 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr13:96331000-96336400 Weak transcription Fetal Stomach stomach
39 chr13:96331200-96331600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr13:96331200-96331600 Enhancers Primary T helper cells PMA-I stimulated --
41 chr13:96331200-96331600 Enhancers Brain Substantia Nigra brain
42 chr13:96331200-96331600 Flanking Active TSS NHEK skin
43 chr13:96331200-96331800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
44 chr13:96331200-96331800 Active TSS Primary hematopoietic stem cells blood
45 chr13:96331200-96331800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr13:96331200-96331800 Enhancers Colon Smooth Muscle Colon
47 chr13:96331200-96331800 Enhancers Stomach Mucosa stomach
48 chr13:96331200-96332000 Enhancers Brain Angular Gyrus brain
49 chr13:96331200-96332000 Enhancers Brain Cingulate Gyrus brain
50 chr13:96331200-96332000 Flanking Active TSS Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015