The 2.0 version of rSNPBase

Variant report

Variant rs73554999
Chromosome Location chr13:96438652-96438653
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96398400-96439400 Weak transcription Brain Hippocampus Middle brain
2 chr13:96404000-96439400 Weak transcription Thymus Thymus
3 chr13:96405400-96439400 Weak transcription Brain Cingulate Gyrus brain
4 chr13:96405400-96452600 Weak transcription Psoas Muscle Psoas
5 chr13:96405600-96455800 Weak transcription Fetal Heart heart
6 chr13:96407200-96439400 Weak transcription Brain Anterior Caudate brain
7 chr13:96408400-96443600 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr13:96408600-96443200 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr13:96408600-96445400 Weak transcription K562 blood
10 chr13:96411400-96439400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:96412000-96443400 Weak transcription Colonic Mucosa Colon
12 chr13:96413200-96439800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr13:96414000-96443400 Weak transcription Brain Angular Gyrus brain
14 chr13:96414400-96443400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr13:96415600-96439400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr13:96416200-96439200 Weak transcription Brain Substantia Nigra brain
17 chr13:96416200-96439200 Weak transcription Fetal Muscle Trunk muscle
18 chr13:96416200-96443400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr13:96416200-96445400 Weak transcription Fetal Kidney kidney
20 chr13:96416400-96440000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr13:96416400-96440200 Weak transcription HepG2 liver
22 chr13:96417600-96439400 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr13:96417600-96439400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr13:96422200-96440600 Weak transcription Fetal Lung lung
25 chr13:96422400-96439400 Weak transcription Small Intestine intestine
26 chr13:96423800-96439600 Weak transcription Esophagus oesophagus
27 chr13:96429600-96444200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr13:96430000-96457400 Weak transcription Brain Germinal Matrix brain
29 chr13:96431000-96439400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr13:96431600-96442400 Weak transcription Fetal Brain Female brain
31 chr13:96432400-96443000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr13:96433000-96453000 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr13:96433600-96439200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr13:96433800-96439000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr13:96433800-96439000 Weak transcription Fetal Intestine Large intestine
36 chr13:96433800-96439400 Weak transcription Lung lung
37 chr13:96433800-96439400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr13:96433800-96439400 Weak transcription Spleen Spleen
39 chr13:96434000-96439200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
40 chr13:96434000-96439200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr13:96434200-96439600 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr13:96434200-96441600 Weak transcription Fetal Intestine Small intestine
43 chr13:96434400-96443400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
44 chr13:96435000-96445800 Strong transcription Primary B cells from cord blood blood
45 chr13:96435000-96447800 Strong transcription Monocytes-CD14+_RO01746 blood
46 chr13:96435600-96447200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr13:96435800-96446800 Strong transcription Primary T cells from cord blood blood
48 chr13:96436000-96440800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
49 chr13:96436000-96449000 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr13:96436200-96446600 Strong transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015