The 2.0 version of rSNPBase

Variant report

Variant rs73556777
Chromosome Location chr13:96493644-96493645
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96476000-96502600 Weak transcription Fetal Heart heart
2 chr13:96478000-96498200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:96478000-96502600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr13:96478000-96502600 Weak transcription Left Ventricle heart
5 chr13:96478000-96568400 Weak transcription Placenta Placenta
6 chr13:96478200-96495000 Weak transcription Lung lung
7 chr13:96478200-96502200 Weak transcription Stomach Smooth Muscle stomach
8 chr13:96478200-96502600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr13:96478200-96502600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr13:96478200-96502600 Weak transcription Aorta Aorta
11 chr13:96478200-96502600 Weak transcription Fetal Stomach stomach
12 chr13:96478200-96502600 Weak transcription Gastric stomach
13 chr13:96478200-96502600 Weak transcription Ovary ovary
14 chr13:96486400-96502400 Weak transcription Osteobl bone
15 chr13:96486400-96502600 Weak transcription Hela-S3 cervix
16 chr13:96486400-96502600 Weak transcription NHLF lung
17 chr13:96486400-96503000 Weak transcription NHDF-Ad bronchial
18 chr13:96486600-96502200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr13:96486600-96502200 Weak transcription Muscle Satellite Cultured Cells --
20 chr13:96486600-96502400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr13:96486600-96502400 Weak transcription HMEC breast
22 chr13:96486600-96502600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr13:96486600-96502600 Weak transcription NH-A brain
24 chr13:96487000-96510000 Weak transcription HUVEC blood vessel
25 chr13:96490400-96502200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr13:96491000-96502200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr13:96491600-96500200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr13:96492200-96500000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr13:96492800-96493800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
30 chr13:96493400-96494000 Strong transcription HSMM muscle
31 chr13:96493600-96493800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr13:96493600-96493800 ZNF genes & repeats H9 Cell Line embryonic stem cell
33 chr13:96493600-96493800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
34 chr13:96493600-96493800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr13:96493600-96493800 ZNF genes & repeats Fetal Muscle Leg muscle
36 chr13:96493600-96493800 Enhancers Pancreas Pancrea
37 chr13:96493600-96493800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon
38 chr13:96493600-96502200 Weak transcription Cortex derived primary cultured neurospheres brain

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Last update: Aug 31, 2015