The 2.0 version of rSNPBase

Variant report

Variant rs73560867
Chromosome Location chr13:96611098-96611099
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96577000-96623200 Weak transcription NHLF lung
2 chr13:96588800-96611200 Weak transcription Gastric stomach
3 chr13:96589000-96611800 Weak transcription A549 lung
4 chr13:96589000-96611800 Weak transcription HepG2 liver
5 chr13:96589000-96612000 Weak transcription Brain Inferior Temporal Lobe brain
6 chr13:96589000-96615600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr13:96591600-96622000 Weak transcription Hela-S3 cervix
8 chr13:96592200-96611200 Weak transcription Liver Liver
9 chr13:96592200-96611800 Weak transcription Aorta Aorta
10 chr13:96592200-96612000 Weak transcription Stomach Smooth Muscle stomach
11 chr13:96592200-96616200 Weak transcription Brain Angular Gyrus brain
12 chr13:96592400-96611400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr13:96594600-96613000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr13:96599000-96623600 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr13:96599400-96620600 Weak transcription HSMM muscle
16 chr13:96599600-96613000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr13:96599600-96613000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr13:96600200-96620800 Weak transcription Osteobl bone
19 chr13:96601200-96613200 Weak transcription Muscle Satellite Cultured Cells --
20 chr13:96601400-96611200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr13:96601600-96611200 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr13:96604000-96611600 Weak transcription Ovary ovary
23 chr13:96604000-96613000 Weak transcription Right Ventricle heart
24 chr13:96604000-96620600 Weak transcription Left Ventricle heart
25 chr13:96605800-96612200 Weak transcription Colon Smooth Muscle Colon
26 chr13:96606200-96611600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr13:96609200-96611400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr13:96609200-96611600 Weak transcription Adipose Nuclei Adipose
29 chr13:96609200-96612000 Weak transcription Duodenum Mucosa Duodenum
30 chr13:96609400-96612000 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr13:96609400-96612800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr13:96609400-96623600 Weak transcription H1 Cell Line embryonic stem cell
33 chr13:96609800-96612800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr13:96609800-96613000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr13:96609800-96636200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr13:96610000-96612400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr13:96610200-96612000 Weak transcription Fetal Heart heart
38 chr13:96610400-96611800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr13:96610800-96611600 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr13:96610800-96612200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr13:96611000-96611200 ZNF genes & repeats Fetal Lung lung
42 chr13:96611000-96611600 ZNF genes & repeats Fetal Muscle Trunk muscle
43 chr13:96611000-96611800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr13:96611000-96611800 Strong transcription Pancreas Pancrea
45 chr13:96611000-96611800 Strong transcription Skeletal Muscle Male skeletal muscle
46 chr13:96611000-96612000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr13:96611000-96612000 ZNF genes & repeats GM12878-XiMat blood
48 chr13:96611000-96612200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr13:96611000-96612200 ZNF genes & repeats Fetal Intestine Small intestine
50 chr13:96611000-96612200 ZNF genes & repeats Fetal Muscle Leg muscle

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Last update: Aug 31, 2015