Variant report

Variant	rs73580614
Chromosome Location	chr8:36213012-36213013
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 153 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:150)

rs_ID	r²[population]
rs10103388	1.00[EUR][1000 genomes]
rs10111851	1.00[EUR][1000 genomes]
rs10503987	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10503989	1.00[EUR][1000 genomes]
rs10503992	1.00[EUR][1000 genomes]
rs1157478	1.00[EUR][1000 genomes]
rs16875874	1.00[EUR][1000 genomes]
rs16884907	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884936	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884940	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884942	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884948	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884954	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884958	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884962	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884965	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs16884968	1.00[EUR][1000 genomes]
rs16884969	1.00[EUR][1000 genomes]
rs16884977	1.00[EUR][1000 genomes]
rs16884979	1.00[EUR][1000 genomes]
rs16884990	1.00[EUR][1000 genomes]
rs16884995	1.00[EUR][1000 genomes]
rs16884996	1.00[EUR][1000 genomes]
rs16885001	1.00[EUR][1000 genomes]
rs16885015	1.00[EUR][1000 genomes]
rs16885016	1.00[EUR][1000 genomes]
rs16885018	1.00[EUR][1000 genomes]
rs16885021	1.00[EUR][1000 genomes]
rs16885026	1.00[EUR][1000 genomes]
rs16885028	1.00[EUR][1000 genomes]
rs16885037	1.00[EUR][1000 genomes]
rs16885107	1.00[EUR][1000 genomes]
rs16885108	1.00[EUR][1000 genomes]
rs16885109	1.00[EUR][1000 genomes]
rs16885113	1.00[EUR][1000 genomes]
rs16885115	1.00[EUR][1000 genomes]
rs16885121	1.00[EUR][1000 genomes]
rs16885123	1.00[EUR][1000 genomes]
rs16885125	1.00[EUR][1000 genomes]
rs16885130	1.00[EUR][1000 genomes]
rs16885138	1.00[EUR][1000 genomes]
rs16885140	1.00[EUR][1000 genomes]
rs16885145	1.00[EUR][1000 genomes]
rs16885153	1.00[EUR][1000 genomes]
rs16885190	1.00[EUR][1000 genomes]
rs16885198	1.00[EUR][1000 genomes]
rs17382352	1.00[EUR][1000 genomes]
rs2000448	1.00[EUR][1000 genomes]
rs2068440	1.00[EUR][1000 genomes]
rs2154461	1.00[EUR][1000 genomes]
rs2406724	1.00[EUR][1000 genomes]
rs2702470	1.00[EUR][1000 genomes]
rs2702491	1.00[EUR][1000 genomes]
rs2702496	1.00[EUR][1000 genomes]
rs2843885	1.00[EUR][1000 genomes]
rs2843886	1.00[EUR][1000 genomes]
rs2843887	1.00[EUR][1000 genomes]
rs3925927	1.00[EUR][1000 genomes]
rs56803225	1.00[EUR][1000 genomes]
rs57136274	1.00[EUR][1000 genomes]
rs57308719	1.00[EUR][1000 genomes]
rs57758553	1.00[EUR][1000 genomes]
rs57959662	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57990211	1.00[EUR][1000 genomes]
rs58431274	1.00[EUR][1000 genomes]
rs58562297	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59143074	1.00[EUR][1000 genomes]
rs59174733	1.00[EUR][1000 genomes]
rs59261730	1.00[EUR][1000 genomes]
rs59452926	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs59640681	1.00[EUR][1000 genomes]
rs59802891	1.00[EUR][1000 genomes]
rs60158913	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60587267	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs60883951	1.00[EUR][1000 genomes]
rs61124681	1.00[EUR][1000 genomes]
rs61338707	1.00[EUR][1000 genomes]
rs6982709	1.00[EUR][1000 genomes]
rs6983386	1.00[EUR][1000 genomes]
rs6984795	1.00[EUR][1000 genomes]
rs6985764	1.00[EUR][1000 genomes]
rs6985948	1.00[EUR][1000 genomes]
rs6991021	1.00[EUR][1000 genomes]
rs7006112	1.00[EUR][1000 genomes]
rs7009892	1.00[EUR][1000 genomes]
rs7010563	1.00[EUR][1000 genomes]
rs7013702	1.00[EUR][1000 genomes]
rs7018078	1.00[EUR][1000 genomes]
rs73578590	1.00[EUR][1000 genomes]
rs73578626	1.00[EUR][1000 genomes]
rs73578627	1.00[EUR][1000 genomes]
rs73578629	1.00[EUR][1000 genomes]
rs73578630	1.00[EUR][1000 genomes]
rs73578637	1.00[EUR][1000 genomes]
rs73578638	1.00[EUR][1000 genomes]
rs73578644	1.00[EUR][1000 genomes]
rs73578645	1.00[EUR][1000 genomes]
rs73578649	1.00[EUR][1000 genomes]
rs73578650	1.00[EUR][1000 genomes]
rs73578653	1.00[EUR][1000 genomes]
rs73580606	0.99[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73580674	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582414	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582415	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582417	1.00[EUR][1000 genomes]
rs73582420	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582422	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582427	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582428	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582429	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582431	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582493	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582495	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582496	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582502	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73582954	1.00[EUR][1000 genomes]
rs73582970	1.00[EUR][1000 genomes]
rs73582973	1.00[EUR][1000 genomes]
rs73582975	1.00[EUR][1000 genomes]
rs73582980	1.00[EUR][1000 genomes]
rs73582984	1.00[EUR][1000 genomes]
rs73584406	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73585297	1.00[EUR][1000 genomes]
rs73585302	1.00[EUR][1000 genomes]
rs73587404	1.00[EUR][1000 genomes]
rs73587406	1.00[EUR][1000 genomes]
rs73587409	1.00[EUR][1000 genomes]
rs73587410	1.00[EUR][1000 genomes]
rs73587414	1.00[EUR][1000 genomes]
rs73589513	1.00[EUR][1000 genomes]
rs73589516	1.00[EUR][1000 genomes]
rs73589517	1.00[EUR][1000 genomes]
rs73589521	1.00[EUR][1000 genomes]
rs73597492	1.00[EUR][1000 genomes]
rs73597493	1.00[EUR][1000 genomes]
rs73597495	1.00[EUR][1000 genomes]
rs73597496	1.00[EUR][1000 genomes]
rs73597498	1.00[EUR][1000 genomes]
rs73597500	1.00[EUR][1000 genomes]
rs73599424	1.00[EUR][1000 genomes]
rs73599431	1.00[EUR][1000 genomes]
rs73599444	1.00[EUR][1000 genomes]
rs73601408	1.00[EUR][1000 genomes]
rs73601409	1.00[EUR][1000 genomes]
rs73601438	1.00[EUR][1000 genomes]
rs73601439	1.00[EUR][1000 genomes]
rs73601444	1.00[EUR][1000 genomes]
rs73601445	1.00[EUR][1000 genomes]
rs73601448	1.00[EUR][1000 genomes]
rs73601450	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533420	chr8:35358115-36227536	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv890718	chr8:35948467-36224134	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv6153	chr8:36190924-36235553	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:36212800-36213600	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr8:36213000-36213600	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr8:36213000-36213600	Enhancers	iPS-20b Cell Line	embryonic stem cell

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