Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1550043	1.00[EUR][1000 genomes]
rs41275080	1.00[EUR][1000 genomes]
rs55836500	1.00[EUR][1000 genomes]
rs56395277	1.00[EUR][1000 genomes]
rs57201472	1.00[EUR][1000 genomes]
rs58021650	1.00[EUR][1000 genomes]
rs7319834	1.00[EUR][1000 genomes]
rs7320328	1.00[EUR][1000 genomes]
rs7323744	1.00[EUR][1000 genomes]
rs7327695	1.00[EUR][1000 genomes]
rs7333839	1.00[EUR][1000 genomes]
rs7333840	1.00[EUR][1000 genomes]
rs73606279	1.00[EUR][1000 genomes]
rs73612884	1.00[EUR][1000 genomes]
rs73612888	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73612890	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73612892	1.00[EUR][1000 genomes]
rs73612896	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73612897	1.00[EUR][1000 genomes]
rs73615005	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7982044	1.00[EUR][1000 genomes]
rs7983033	1.00[EUR][1000 genomes]
rs7983565	1.00[EUR][1000 genomes]
rs7984919	1.00[EUR][1000 genomes]
rs7992797	1.00[EUR][1000 genomes]
rs8000352	1.00[EUR][1000 genomes]
rs9301428	1.00[EUR][1000 genomes]
rs9583434	1.00[EUR][1000 genomes]
rs9588062	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832719	chr13:110512259-110655883	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:110537400-110543200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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