Variant report

Variant	rs73634061
Chromosome Location	chrX:138818178-138818179
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chrX:138796802..138798801-chrX:138817390..138820201,2	K562	blood:
2	chrX:138816237..138818464-chrX:139013514..139016259,2	K562	blood:

Variant related genes	Relation type
ENSG00000101974	Chromatin interaction

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532936	chrX:138687855-139384681	Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	148 gene(s)	inside rSNPs	diseases
2	nsv491760	chrX:138780768-139283477	Active TSS Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	147 gene(s)	inside rSNPs	diseases
3	nsv7116	chrX:138815720-138851105	Enhancers Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:70 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:138797000-138821000	Weak transcription	Primary T cells from cord blood	blood
2	chrX:138802200-138818800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chrX:138802200-138836600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chrX:138802400-138820800	Weak transcription	Hela-S3	cervix
5	chrX:138802400-138821800	Weak transcription	HSMM	muscle
6	chrX:138802600-138820400	Weak transcription	HUVEC	blood vessel
7	chrX:138803800-138821000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chrX:138804800-138832000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chrX:138805200-138829200	Weak transcription	Duodenum Mucosa	Duodenum
10	chrX:138805400-138819600	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chrX:138805400-138835200	Weak transcription	Primary hematopoietic stem cells	blood
12	chrX:138805800-138820800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chrX:138806400-138819600	Weak transcription	Fetal Intestine Large	intestine
14	chrX:138806600-138836400	Weak transcription	Dnd41	blood
15	chrX:138806800-138820800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chrX:138806800-138866800	Weak transcription	Left Ventricle	heart
17	chrX:138807200-138858200	Weak transcription	Primary B cells from cord blood	blood
18	chrX:138807600-138820800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chrX:138807600-138831200	Weak transcription	Fetal Muscle Trunk	muscle
20	chrX:138807800-138825400	Weak transcription	Rectal Mucosa Donor 29	rectum
21	chrX:138807800-138832400	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chrX:138808200-138835600	Weak transcription	Fetal Stomach	stomach
23	chrX:138808400-138832600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chrX:138809000-138822600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chrX:138809000-138836000	Weak transcription	Adipose Nuclei	Adipose
26	chrX:138809600-138818600	Weak transcription	Primary T helper cells PMA-I stimulated	--
27	chrX:138810000-138818800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chrX:138810000-138827200	Weak transcription	Stomach Smooth Muscle	stomach
29	chrX:138810000-138835000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
30	chrX:138810600-138820400	Weak transcription	HSMMtube	muscle
31	chrX:138810600-138840400	Weak transcription	K562	blood
32	chrX:138811200-138834800	Weak transcription	Spleen	Spleen
33	chrX:138811400-138822400	Weak transcription	Primary T helper cells fromperipheralblood	blood
34	chrX:138811800-138818800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
35	chrX:138812200-138832200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chrX:138812800-138818600	Weak transcription	Muscle Satellite Cultured Cells	--
37	chrX:138812800-138826000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chrX:138812800-138831200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chrX:138812800-138835600	Weak transcription	Fetal Thymus	thymus
40	chrX:138813600-138833400	Weak transcription	H1 Cell Line	embryonic stem cell
41	chrX:138814000-138820800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chrX:138814000-138883600	Weak transcription	Gastric	stomach
43	chrX:138814200-138848400	Weak transcription	H9 Cell Line	embryonic stem cell
44	chrX:138814400-138821200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chrX:138814600-138827200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chrX:138815200-138827200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chrX:138815200-138849000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
48	chrX:138815400-138819400	Strong transcription	Primary T cells fromperipheralblood	blood
49	chrX:138815400-138821000	Weak transcription	Osteobl	bone
50	chrX:138815400-138829200	Weak transcription	HepG2	liver

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