Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:54457371..54459608-chr8:54460405..54462056,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10093917	0.95[EUR][1000 genomes]
rs12114990	0.87[EUR][1000 genomes]
rs1551906	0.89[EUR][1000 genomes]
rs1551907	0.89[EUR][1000 genomes]
rs1551908	0.89[EUR][1000 genomes]
rs1871093	0.89[EUR][1000 genomes]
rs28414831	0.91[EUR][1000 genomes]
rs28448344	0.89[EUR][1000 genomes]
rs28498249	0.89[EUR][1000 genomes]
rs28679737	0.93[EUR][1000 genomes]
rs6473849	0.89[EUR][1000 genomes]
rs6473873	0.84[EUR][1000 genomes]
rs6983490	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6987393	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7008567	0.89[EUR][1000 genomes]
rs7009706	0.95[EUR][1000 genomes]
rs7011096	0.89[EUR][1000 genomes]
rs73680192	0.95[EUR][1000 genomes]
rs73680445	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73682504	0.91[EUR][1000 genomes]
rs73682506	0.91[EUR][1000 genomes]
rs73682527	0.86[EUR][1000 genomes]
rs7825111	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752674	chr8:54181147-54483747	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:54459200-54459800	Active TSS	Gastric	stomach
2	chr8:54459400-54463800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived

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