Variant report

Variant	rs73683829
Chromosome Location	chr8:58292701-58292702
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs55685345	1.00[AMR][1000 genomes]
rs55713077	1.00[AMR][1000 genomes]
rs55830805	1.00[AMR][1000 genomes]
rs73680560	0.92[AFR][1000 genomes]
rs73681757	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73681758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73682189	1.00[AMR][1000 genomes]
rs73682191	0.85[AFR][1000 genomes]
rs73682195	1.00[AMR][1000 genomes]
rs73682196	1.00[AMR][1000 genomes]
rs73682383	1.00[AMR][1000 genomes]
rs73682389	1.00[AMR][1000 genomes]
rs73682393	1.00[AMR][1000 genomes]
rs73682396	1.00[AMR][1000 genomes]
rs73684420	1.00[AMR][1000 genomes]
rs73684431	1.00[AMR][1000 genomes]
rs73684432	1.00[AMR][1000 genomes]
rs73684437	1.00[AMR][1000 genomes]
rs73684438	1.00[AMR][1000 genomes]
rs7822656	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7837934	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758161	chr8:57930392-58474449	Enhancers Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2759618	chr8:57930392-58474449	Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv533217	chr8:57991065-58789001	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
4	nsv890936	chr8:58266339-58564501	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58291000-58293000	Enhancers	Placenta Amnion	Placenta Amnion
2	chr8:58291600-58293000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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