Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:53619296..53622217-chr8:62032512..62034545,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11992507	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11996308	0.83[AFR][1000 genomes]
rs16926906	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16926938	1.00[EUR][1000 genomes]
rs1835758	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56031720	1.00[EUR][1000 genomes]
rs59775198	1.00[EUR][1000 genomes]
rs60420622	1.00[EUR][1000 genomes]
rs73685726	1.00[EUR][1000 genomes]
rs73685727	1.00[EUR][1000 genomes]
rs73685728	1.00[EUR][1000 genomes]
rs73685729	1.00[EUR][1000 genomes]
rs73685730	1.00[EUR][1000 genomes]
rs73685731	1.00[EUR][1000 genomes]
rs73685733	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73685734	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73685735	1.00[EUR][1000 genomes]
rs73685738	1.00[EUR][1000 genomes]
rs73685740	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73685742	1.00[EUR][1000 genomes]
rs73685743	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948922	chr8:61818964-62475097	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:62033800-62034200	Active TSS	ES-I3 Cell Line	embryonic stem cell
2	chr8:62033800-62034200	Active TSS	H9 Cell Line	embryonic stem cell
3	chr8:62034000-62034200	Flanking Active TSS	HUES48 Cell Line	embryonic stem cell
4	chr8:62034000-62034200	Flanking Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr8:62034000-62034400	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
6	chr8:62034000-62034400	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
7	chr8:62034000-62034400	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
8	chr8:62034000-62034400	Flanking Active TSS	K562	blood
9	chr8:62034000-62034600	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
10	chr8:62034000-62034800	Enhancers	H1 Cell Line	embryonic stem cell
11	chr8:62034000-62035000	Enhancers	Fetal Brain Female	brain
12	chr8:62034000-62035200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr8:62034000-62037000	Enhancers	GM12878-XiMat	blood

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