Variant report

Variant	rs73700814
Chromosome Location	chr8:110176358-110176359
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs16879239	1.00[AMR][1000 genomes]
rs16879247	1.00[AMR][1000 genomes]
rs16879267	1.00[AMR][1000 genomes]
rs16879294	1.00[AMR][1000 genomes]
rs16879299	1.00[AMR][1000 genomes]
rs16879374	1.00[AMR][1000 genomes]
rs1870390	1.00[AMR][1000 genomes]
rs57770774	0.82[AFR][1000 genomes]
rs58174582	1.00[AMR][1000 genomes]
rs58370875	1.00[AMR][1000 genomes]
rs58371935	0.89[AFR][1000 genomes]
rs59199171	1.00[AMR][1000 genomes]
rs59651628	1.00[AMR][1000 genomes]
rs60279960	1.00[AMR][1000 genomes]
rs60417655	1.00[AMR][1000 genomes]
rs60584579	1.00[AMR][1000 genomes]
rs61706619	1.00[AMR][1000 genomes]
rs73700806	0.82[AFR][1000 genomes]
rs73700810	0.89[AFR][1000 genomes]
rs73700815	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700826	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700827	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700828	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700831	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700837	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700840	1.00[AMR][1000 genomes]
rs73700846	1.00[AMR][1000 genomes]
rs73700849	1.00[AMR][1000 genomes]
rs73700852	1.00[AMR][1000 genomes]
rs73700853	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023204	chr8:110169573-110303085	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110175400-110181400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:110176200-110176600	Enhancers	Gastric	stomach
3	chr8:110176200-110176600	ZNF genes & repeats	Lung	lung
4	chr8:110176200-110176800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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