Variant report

Variant	rs73700874
Chromosome Location	chr8:110399377-110399378
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:110388617..110395072-chr8:110396032..110405839,11	K562	blood:
2	chr8:110397526..110401680-chr8:110402055..110405525,5	K562	blood:
3	chr8:110397373..110399828-chr8:110505690..110508375,2	K562	blood:
4	chr8:110391499..110394340-chr8:110396610..110400316,3	K562	blood:
5	chr8:110374002..110377737-chr8:110399223..110401592,3	K562	blood:
6	chr8:110397376..110399556-chr8:110407254..110410081,2	K562	blood:
7	chr8:110399100..110401680-chr8:110403337..110405156,2	K562	blood:

No data

No data

No data

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs57288963	1.00[AMR][1000 genomes]
rs58327018	1.00[AMR][1000 genomes]
rs60754015	1.00[AMR][1000 genomes]
rs60976515	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700861	0.95[AFR][1000 genomes]
rs73700862	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700864	1.00[AMR][1000 genomes]
rs73700878	1.00[AMR][1000 genomes]
rs73700881	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700887	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891273	chr8:110219735-110475874	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
2	nsv891279	chr8:110268104-110450092	Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
3	nsv891280	chr8:110346363-110465481	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv972244	chr8:110389671-110400955	Weak transcription Enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
5	esv1845153	chr8:110397738-110421793	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	esv1832336	chr8:110397738-110437384	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110398600-110401400	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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