Variant report

Variant	rs737185
Chromosome Location	chr11:76485358-76485359
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:76479171..76486141-chr11:76745972..76752965,12	MCF-7	breast:
2	chr11:76484600..76489060-chr11:76497459..76500806,4	K562	blood:
3	chr11:76446515..76448277-chr11:76483918..76485534,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000198488	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10160660	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10160769	0.99[EUR][1000 genomes]
rs10437754	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793194	0.94[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10793195	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10899278	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10899279	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10899280	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10899281	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10899282	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10899283	0.98[EUR][1000 genomes]
rs11236923	0.84[ASN][1000 genomes]
rs11236924	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11236936	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs12273016	0.85[JPT][hapmap];0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12282785	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12290350	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12788118	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1440977	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1440978	0.94[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1440979	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs1440980	0.97[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1465900	1.00[CEU][hapmap];0.91[CHB][hapmap];0.93[JPT][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1837679	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1837680	0.95[CEU][hapmap];0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1866843	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3758711	0.94[CEU][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4309181	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56228827	0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7107409	0.83[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7933092	0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7942337	0.96[EUR][1000 genomes]
rs7942368	0.96[EUR][1000 genomes]

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76474000-76485600	Enhancers	Left Ventricle	heart
2	chr11:76474400-76485400	Enhancers	Fetal Muscle Leg	muscle
3	chr11:76476200-76485600	Enhancers	Fetal Intestine Large	intestine
4	chr11:76478400-76485400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:76478800-76485600	Enhancers	Placenta	Placenta
6	chr11:76480000-76485400	Enhancers	Adipose Nuclei	Adipose
7	chr11:76480200-76486200	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr11:76480600-76485600	Enhancers	Stomach Mucosa	stomach
9	chr11:76481000-76487800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr11:76481400-76485600	Enhancers	Ovary	ovary
11	chr11:76482000-76485600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr11:76482000-76485600	Enhancers	Right Atrium	heart
13	chr11:76482800-76486000	Enhancers	Liver	Liver
14	chr11:76482800-76492400	Weak transcription	Placenta Amnion	Placenta Amnion
15	chr11:76483000-76485800	Enhancers	Hela-S3	cervix
16	chr11:76483400-76485600	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr11:76483600-76485600	Enhancers	Esophagus	oesophagus
18	chr11:76483600-76486000	Enhancers	Fetal Muscle Trunk	muscle
19	chr11:76483600-76487600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr11:76483800-76485400	Enhancers	Right Ventricle	heart
21	chr11:76483800-76485600	Enhancers	Pancreas	Pancrea
22	chr11:76483800-76485600	Enhancers	Psoas Muscle	Psoas
23	chr11:76484000-76485400	Enhancers	Sigmoid Colon	Sigmoid Colon
24	chr11:76484000-76485600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr11:76484000-76485600	Enhancers	Aorta	Aorta
26	chr11:76484200-76485400	Enhancers	Rectal Mucosa Donor 31	rectum
27	chr11:76484200-76485600	Enhancers	HepG2	liver
28	chr11:76484200-76485800	Enhancers	Skeletal Muscle Male	skeletal muscle
29	chr11:76484400-76485400	Enhancers	Colon Smooth Muscle	Colon
30	chr11:76484600-76485600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
31	chr11:76484600-76485600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
32	chr11:76484600-76485600	Enhancers	HMEC	breast
33	chr11:76484600-76485800	Enhancers	NHEK	skin
34	chr11:76484600-76487400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr11:76484800-76485400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr11:76484800-76485400	Enhancers	H9 Cell Line	embryonic stem cell
37	chr11:76484800-76485400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr11:76484800-76485400	Enhancers	Lung	lung
39	chr11:76485000-76485400	Enhancers	HUES6 Cell Line	embryonic stem cell
40	chr11:76485000-76485400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr11:76485200-76485400	Enhancers	iPS-18 Cell Line	embryonic stem cell
42	chr11:76485200-76485400	Enhancers	HSMMtube	muscle
43	chr11:76485200-76485600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr11:76485200-76486000	ZNF genes & repeats	A549	lung

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