Variant report

Variant	rs73744517
Chromosome Location	chr7:147349401-147349402
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11971275	1.00[AMR][1000 genomes]
rs60485461	1.00[AMR][1000 genomes]
rs60716861	1.00[AMR][1000 genomes]
rs73458209	1.00[AMR][1000 genomes]
rs73458234	1.00[AMR][1000 genomes]
rs73741405	1.00[AMR][1000 genomes]
rs73741406	1.00[AMR][1000 genomes]
rs73741407	1.00[AMR][1000 genomes]
rs73741412	1.00[AMR][1000 genomes]
rs73744510	1.00[AMR][1000 genomes]
rs7808578	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931005	chr7:146730472-147381257	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	7 gene(s)	inside rSNPs	diseases
2	nsv516942	chr7:147337742-147354931	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	nsv527018	chr7:147337742-147360817	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:147349000-147350400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr7:147349000-147355600	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr7:147349000-147355600	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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