Variant report

Variant	rs73766043
Chromosome Location	chr6:64986285-64986286
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs28445464	1.00[EUR][1000 genomes]
rs55970733	1.00[EUR][1000 genomes]
rs56177406	1.00[EUR][1000 genomes]
rs56780164	1.00[AMR][1000 genomes]
rs59962897	1.00[EUR][1000 genomes]
rs6941680	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73763355	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73764421	1.00[EUR][1000 genomes]
rs73764802	1.00[EUR][1000 genomes]
rs73766031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73766032	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73766036	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73766038	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73766066	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73767537	1.00[EUR][1000 genomes]
rs73767804	1.00[EUR][1000 genomes]
rs7757774	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7763168	1.00[EUR][1000 genomes]
rs7774242	1.00[AMR][1000 genomes]
rs9784866	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026162	chr6:64639580-65470828	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv538272	chr6:64639580-65470828	Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1015718	chr6:64821273-65479726	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv1033519	chr6:64843989-65017528	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv1024558	chr6:64876263-65000031	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv885993	chr6:64885858-65050050	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv885995	chr6:64914258-65050050	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv885996	chr6:64914258-65081343	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv885997	chr6:64920494-64998321	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv885999	chr6:64946169-65227097	Enhancers Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
11	nsv886000	chr6:64955968-65081343	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv462968	chr6:64971436-65018685	Enhancers ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv462969	chr6:64971436-65018685	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv603390	chr6:64971436-65018685	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv462970	chr6:64971436-65198215	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
16	nsv603391	chr6:64971436-65198215	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:64985800-64986800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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