Variant report

Variant	rs73789227
Chromosome Location	chr6:148949127-148949128
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs56108830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61455434	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6909491	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789214	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789215	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789216	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789219	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789220	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789221	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789222	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789223	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789224	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789226	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789229	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73789231	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:148944400-148950200	Weak transcription	Colon Smooth Muscle	Colon
2	chr6:148945600-148950200	Weak transcription	NHDF-Ad	bronchial
3	chr6:148945600-148950600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr6:148945600-148950600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:148945800-148950400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:148946000-148949200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:148946400-148950600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr6:148946800-148950800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr6:148947400-148949800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:148947600-148950400	Weak transcription	Adipose Nuclei	Adipose
11	chr6:148947600-148950400	Weak transcription	Fetal Stomach	stomach
12	chr6:148948800-148951000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr6:148949000-148949200	Enhancers	HSMMtube	muscle
14	chr6:148949000-148949400	Enhancers	H9 Cell Line	embryonic stem cell
15	chr6:148949000-148950800	Enhancers	Fetal Thymus	thymus
16	chr6:148949000-148951200	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr6:148949000-148951400	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr6:148949000-148951400	Enhancers	HUES6 Cell Line	embryonic stem cell
19	chr6:148949000-148951400	Enhancers	iPS-15b Cell Line	embryonic stem cell
20	chr6:148949000-148951400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr6:148949000-148951600	Enhancers	HUES48 Cell Line	embryonic stem cell

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