The 2.0 version of rSNPBase

Variant report

Variant rs73828046
Chromosome Location chr4:79526265-79526266
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79474400-79527200 Weak transcription Spleen Spleen
2 chr4:79483000-79530000 Weak transcription H9 Cell Line embryonic stem cell
3 chr4:79488400-79527400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr4:79490800-79532600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr4:79491000-79529600 Weak transcription Aorta Aorta
6 chr4:79491200-79535400 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr4:79491800-79533200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr4:79491800-79542600 Weak transcription NH-A brain
9 chr4:79492000-79531600 Strong transcription HMEC breast
10 chr4:79502200-79529200 Weak transcription Colonic Mucosa Colon
11 chr4:79502400-79532200 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr4:79508200-79533600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr4:79508800-79527000 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr4:79508800-79527400 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr4:79512600-79534200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr4:79512600-79536800 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr4:79513800-79534200 Strong transcription NHEK skin
18 chr4:79517200-79534800 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr4:79518000-79548000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr4:79518400-79528200 Strong transcription Fetal Intestine Large intestine
21 chr4:79518600-79543600 Weak transcription Stomach Mucosa stomach
22 chr4:79519200-79528400 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr4:79521200-79527600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr4:79521400-79529800 Weak transcription Primary hematopoietic stem cells blood
25 chr4:79521400-79534000 Weak transcription Right Ventricle heart
26 chr4:79522200-79526600 Strong transcription HUES64 Cell Line embryonic stem cell
27 chr4:79522200-79529600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr4:79522600-79531200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr4:79522600-79531600 Weak transcription HSMMtube muscle
30 chr4:79523600-79533800 Strong transcription Breast Myoepithelial Primary Cells Breast
31 chr4:79523800-79528800 Strong transcription Stomach Smooth Muscle stomach
32 chr4:79524000-79527200 Weak transcription Left Ventricle heart
33 chr4:79524000-79528200 Weak transcription Colon Smooth Muscle Colon
34 chr4:79524200-79526400 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr4:79524200-79526800 Weak transcription Fetal Intestine Small intestine
36 chr4:79524200-79526800 Weak transcription Fetal Stomach stomach
37 chr4:79524200-79526800 Weak transcription Gastric stomach
38 chr4:79524200-79527000 Weak transcription Esophagus oesophagus
39 chr4:79524200-79527000 Weak transcription Lung lung
40 chr4:79524200-79527200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr4:79524200-79528800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr4:79524200-79529000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr4:79524200-79529800 Weak transcription Fetal Heart heart
44 chr4:79524200-79543400 Weak transcription A549 lung
45 chr4:79524400-79530400 Weak transcription Hela-S3 cervix
46 chr4:79524400-79532000 Weak transcription Pancreas Pancrea
47 chr4:79524400-79534000 Weak transcription Placenta Placenta
48 chr4:79524600-79527200 Weak transcription Adipose Nuclei Adipose
49 chr4:79524800-79530000 Weak transcription Primary T cells from cord blood blood
50 chr4:79525000-79529600 Weak transcription K562 blood

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Last update: Aug 31, 2015