The 2.0 version of rSNPBase

Variant report

Variant rs73828057
Chromosome Location chr4:79536925-79536926
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79491800-79542600 Weak transcription NH-A brain
2 chr4:79518000-79548000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:79518600-79543600 Weak transcription Stomach Mucosa stomach
4 chr4:79524200-79543400 Weak transcription A549 lung
5 chr4:79527800-79542600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:79527800-79542600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:79529400-79537600 Enhancers Dnd41 blood
8 chr4:79529800-79537000 Enhancers Primary hematopoietic stem cells blood
9 chr4:79530000-79540000 Enhancers Primary T cells from cord blood blood
10 chr4:79531400-79543000 Weak transcription Hela-S3 cervix
11 chr4:79531800-79543200 Weak transcription HUVEC blood vessel
12 chr4:79532000-79537200 Weak transcription HSMM muscle
13 chr4:79532400-79537200 Weak transcription Muscle Satellite Cultured Cells --
14 chr4:79532400-79537200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr4:79532600-79537200 Weak transcription NHDF-Ad bronchial
16 chr4:79533800-79538600 Enhancers Fetal Intestine Large intestine
17 chr4:79533800-79541000 Enhancers Fetal Intestine Small intestine
18 chr4:79533800-79548800 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr4:79534200-79537200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr4:79534200-79537200 Weak transcription HMEC breast
21 chr4:79534200-79537200 Weak transcription NHEK skin
22 chr4:79534600-79547800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr4:79534800-79537000 Enhancers Cortex derived primary cultured neurospheres brain
24 chr4:79534800-79538200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr4:79535200-79538000 Enhancers K562 blood
26 chr4:79535400-79542600 Weak transcription Placenta Placenta
27 chr4:79535600-79539200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr4:79535600-79543000 Weak transcription ES-I3 Cell Line embryonic stem cell
29 chr4:79536200-79537000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr4:79536200-79538200 Enhancers Placenta Amnion Placenta Amnion
31 chr4:79536200-79538600 Weak transcription Primary neutrophils fromperipheralblood blood
32 chr4:79536200-79538600 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr4:79536400-79538600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr4:79536400-79550600 Weak transcription Left Ventricle heart
35 chr4:79536600-79538600 Weak transcription Primary B cells from cord blood blood
36 chr4:79536800-79537000 Enhancers Rectal Mucosa Donor 29 rectum
37 chr4:79536800-79537200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr4:79536800-79537600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr4:79536800-79538400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr4:79536800-79538600 Weak transcription Fetal Thymus thymus
41 chr4:79536800-79539200 Weak transcription GM12878-XiMat blood
42 chr4:79536800-79542600 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015