The 2.0 version of rSNPBase

Variant report

Variant rs73828059
Chromosome Location chr4:79537538-79537539
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79491800-79542600 Weak transcription NH-A brain
2 chr4:79518000-79548000 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr4:79518600-79543600 Weak transcription Stomach Mucosa stomach
4 chr4:79524200-79543400 Weak transcription A549 lung
5 chr4:79527800-79542600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr4:79527800-79542600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr4:79529400-79537600 Enhancers Dnd41 blood
8 chr4:79530000-79540000 Enhancers Primary T cells from cord blood blood
9 chr4:79531400-79543000 Weak transcription Hela-S3 cervix
10 chr4:79531800-79543200 Weak transcription HUVEC blood vessel
11 chr4:79533800-79538600 Enhancers Fetal Intestine Large intestine
12 chr4:79533800-79541000 Enhancers Fetal Intestine Small intestine
13 chr4:79533800-79548800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr4:79534600-79547800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr4:79534800-79538200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr4:79535200-79538000 Enhancers K562 blood
17 chr4:79535400-79542600 Weak transcription Placenta Placenta
18 chr4:79535600-79539200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr4:79535600-79543000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr4:79536200-79538200 Enhancers Placenta Amnion Placenta Amnion
21 chr4:79536200-79538600 Weak transcription Primary neutrophils fromperipheralblood blood
22 chr4:79536200-79538600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr4:79536400-79538600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr4:79536400-79550600 Weak transcription Left Ventricle heart
25 chr4:79536600-79538600 Weak transcription Primary B cells from cord blood blood
26 chr4:79536800-79537600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr4:79536800-79538400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr4:79536800-79538600 Weak transcription Fetal Thymus thymus
29 chr4:79536800-79539200 Weak transcription GM12878-XiMat blood
30 chr4:79536800-79542600 Weak transcription Right Atrium heart
31 chr4:79537000-79538800 Weak transcription Primary hematopoietic stem cells blood
32 chr4:79537000-79545800 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr4:79537200-79537600 Enhancers Muscle Satellite Cultured Cells --
34 chr4:79537200-79537600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr4:79537200-79537800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr4:79537200-79537800 Enhancers HSMM muscle
37 chr4:79537200-79537800 Enhancers NHDF-Ad bronchial
38 chr4:79537400-79537600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr4:79537400-79537600 Enhancers Fetal Brain Male brain

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Last update: Aug 31, 2015