The 2.0 version of rSNPBase

Variant report

Variant rs73828083
Chromosome Location chr4:79567384-79567385
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:79551400-79578200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr4:79557200-79568000 Enhancers Primary B cells from cord blood blood
3 chr4:79561600-79568000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr4:79562000-79568000 Enhancers Primary B cells from peripheral blood blood
5 chr4:79562800-79567600 Enhancers Primary hematopoietic stem cells blood
6 chr4:79563200-79568800 Enhancers Primary monocytes fromperipheralblood blood
7 chr4:79564000-79568000 Enhancers Fetal Intestine Large intestine
8 chr4:79564400-79571400 Weak transcription Fetal Heart heart
9 chr4:79564400-79577200 Weak transcription Fetal Thymus thymus
10 chr4:79564400-79589600 Weak transcription Lung lung
11 chr4:79564800-79567600 Enhancers GM12878-XiMat blood
12 chr4:79565800-79569000 Weak transcription Primary T cells from cord blood blood
13 chr4:79566000-79567800 Enhancers Fetal Intestine Small intestine
14 chr4:79566000-79568000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr4:79566000-79573200 Enhancers Placenta Amnion Placenta Amnion
16 chr4:79566200-79569400 Enhancers Cortex derived primary cultured neurospheres brain
17 chr4:79566400-79567600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr4:79566400-79567600 Enhancers Placenta Placenta
19 chr4:79566400-79567800 Flanking Active TSS Colon Smooth Muscle Colon
20 chr4:79566400-79568000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr4:79566400-79568000 Enhancers Primary hematopoietic stem cells short term culture blood
22 chr4:79566400-79568000 Enhancers Rectal Mucosa Donor 31 rectum
23 chr4:79566400-79568000 Flanking Active TSS HUVEC blood vessel
24 chr4:79566400-79568000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
25 chr4:79566400-79568000 Flanking Active TSS NHEK skin
26 chr4:79566400-79569200 Enhancers Duodenum Mucosa Duodenum
27 chr4:79566600-79567600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
28 chr4:79566600-79567600 Flanking Active TSS NHDF-Ad bronchial
29 chr4:79566600-79567800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr4:79566600-79567800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr4:79566600-79567800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr4:79566600-79567800 Flanking Active TSS Muscle Satellite Cultured Cells --
33 chr4:79566600-79567800 Enhancers Psoas Muscle Psoas
34 chr4:79566600-79567800 Flanking Active TSS HMEC breast
35 chr4:79566600-79567800 Flanking Active TSS NH-A brain
36 chr4:79566600-79567800 Flanking Active TSS Osteobl bone
37 chr4:79566600-79568000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
38 chr4:79566600-79568000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr4:79566600-79568000 Enhancers Fetal Muscle Leg muscle
40 chr4:79566600-79568000 Enhancers Stomach Mucosa stomach
41 chr4:79566600-79568000 Flanking Active TSS A549 lung
42 chr4:79566600-79568000 Flanking Active TSS Hela-S3 cervix
43 chr4:79566600-79568200 Enhancers Fetal Adrenal Gland Adrenal Gland
44 chr4:79566600-79568200 Enhancers Fetal Stomach stomach
45 chr4:79566800-79567400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr4:79566800-79567400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
47 chr4:79566800-79567800 Enhancers ES-I3 Cell Line embryonic stem cell
48 chr4:79566800-79568000 Flanking Active TSS Adipose Nuclei Adipose
49 chr4:79566800-79568000 Flanking Active TSS K562 blood
50 chr4:79566800-79569800 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015