Variant report

Variant	rs73828100
Chromosome Location	chr4:79623074-79623075
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 42 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10452151	1.00[AMR][1000 genomes]
rs55994157	1.00[AMR][1000 genomes]
rs56071306	1.00[AMR][1000 genomes]
rs56098630	1.00[AMR][1000 genomes]
rs57648305	1.00[AMR][1000 genomes]
rs57649400	1.00[AMR][1000 genomes]
rs59055207	1.00[AMR][1000 genomes]
rs59700988	1.00[AMR][1000 genomes]
rs60681937	1.00[AMR][1000 genomes]
rs60950346	1.00[AMR][1000 genomes]
rs60998921	1.00[AMR][1000 genomes]
rs61075598	1.00[AMR][1000 genomes]
rs61238857	1.00[AMR][1000 genomes]
rs73828029	1.00[AMR][1000 genomes]
rs73828034	1.00[AMR][1000 genomes]
rs73828038	1.00[AMR][1000 genomes]
rs73828045	1.00[AMR][1000 genomes]
rs73828046	1.00[AMR][1000 genomes]
rs73828057	1.00[AMR][1000 genomes]
rs73828059	1.00[AMR][1000 genomes]
rs73828064	1.00[AMR][1000 genomes]
rs73828065	1.00[AMR][1000 genomes]
rs73828066	1.00[AMR][1000 genomes]
rs73828067	1.00[AMR][1000 genomes]
rs73828069	1.00[AMR][1000 genomes]
rs73828070	1.00[AMR][1000 genomes]
rs73828071	1.00[AMR][1000 genomes]
rs73828073	1.00[AMR][1000 genomes]
rs73828074	1.00[AMR][1000 genomes]
rs73828075	1.00[AMR][1000 genomes]
rs73828078	1.00[AMR][1000 genomes]
rs73828079	1.00[AMR][1000 genomes]
rs73828080	1.00[AMR][1000 genomes]
rs73828081	1.00[AMR][1000 genomes]
rs73828083	1.00[AMR][1000 genomes]
rs73828092	1.00[AMR][1000 genomes]
rs73828098	1.00[AMR][1000 genomes]
rs73828101	0.83[AFR][1000 genomes]
rs73828102	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73830206	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73830208	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009633	chr4:78887573-79652236	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:79623000-79623600	Weak transcription	K562	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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