Variant report

Variant	rs73839758
Chromosome Location	chr4:96571645-96571646
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs56240907	1.00[AMR][1000 genomes]
rs56963379	1.00[AMR][1000 genomes]
rs73839105	1.00[AMR][1000 genomes]
rs73839106	1.00[AMR][1000 genomes]
rs73839107	1.00[AMR][1000 genomes]
rs73839135	1.00[AMR][1000 genomes]
rs73839136	1.00[AMR][1000 genomes]
rs73839137	1.00[AMR][1000 genomes]
rs73842119	1.00[AMR][1000 genomes]
rs73842149	1.00[AMR][1000 genomes]
rs73842151	1.00[AMR][1000 genomes]
rs73842161	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830012	chr4:96547783-96746163	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1844506	chr4:96554889-96704333	Flanking Active TSS Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1007133	chr4:96556072-96614235	Enhancers Weak transcription Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:96562800-96572600	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr4:96571600-96572200	Active TSS	Brain Cingulate Gyrus	brain
3	chr4:96571600-96572200	Active TSS	Brain Inferior Temporal Lobe	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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