Variant report

Variant	rs73867295
Chromosome Location	chr3:142977536-142977537
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs58149428	1.00[EUR][1000 genomes]
rs60549582	1.00[EUR][1000 genomes]
rs6779325	1.00[EUR][1000 genomes]
rs72992517	1.00[EUR][1000 genomes]
rs73006214	1.00[EUR][1000 genomes]
rs73006216	1.00[EUR][1000 genomes]
rs73006224	1.00[EUR][1000 genomes]
rs73867204	1.00[EUR][1000 genomes]
rs73867205	1.00[EUR][1000 genomes]
rs73867211	1.00[EUR][1000 genomes]
rs73867212	1.00[EUR][1000 genomes]
rs7636796	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949288	chr3:142793323-143585882	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:142963600-142995400	Weak transcription	Primary T cells from cord blood	blood
2	chr3:142973000-143017600	Weak transcription	Primary B cells from cord blood	blood
3	chr3:142973800-142984400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr3:142975800-142985600	Weak transcription	Ovary	ovary
5	chr3:142976000-142984400	Weak transcription	Aorta	Aorta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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