Variant report

Variant	rs73905103
Chromosome Location	chr20:24069442-24069443
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs35761129	1.00[AMR][1000 genomes]
rs55658154	1.00[AMR][1000 genomes]
rs56212225	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58501060	1.00[AMR][1000 genomes]
rs59465726	1.00[AMR][1000 genomes]
rs61224390	1.00[AMR][1000 genomes]
rs73902595	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73902600	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73902602	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73905104	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73905105	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73905108	1.00[AMR][1000 genomes]
rs73905111	1.00[AMR][1000 genomes]
rs73905127	1.00[AMR][1000 genomes]
rs73905129	1.00[AMR][1000 genomes]
rs73905131	1.00[AMR][1000 genomes]
rs73905132	1.00[AMR][1000 genomes]
rs73905136	1.00[AMR][1000 genomes]
rs73905139	1.00[AMR][1000 genomes]
rs73905147	1.00[AMR][1000 genomes]
rs73905148	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9793	chr20:23939613-24734850	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	nsv1056491	chr20:23955040-24105080	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:24068200-24072000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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