Variant report

Variant	rs73905148
Chromosome Location	chr20:24134339-24134340
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs35761129	1.00[AMR][1000 genomes]
rs36063187	1.00[AMR][1000 genomes]
rs55658154	1.00[AMR][1000 genomes]
rs55904634	1.00[AMR][1000 genomes]
rs56212225	1.00[AMR][1000 genomes]
rs58501060	1.00[AMR][1000 genomes]
rs59465726	1.00[AMR][1000 genomes]
rs61224390	1.00[AMR][1000 genomes]
rs73902595	1.00[AMR][1000 genomes]
rs73902600	1.00[AMR][1000 genomes]
rs73902602	1.00[AMR][1000 genomes]
rs73902764	1.00[AMR][1000 genomes]
rs73902766	1.00[AMR][1000 genomes]
rs73902779	1.00[AMR][1000 genomes]
rs73902799	1.00[AMR][1000 genomes]
rs73902800	1.00[AMR][1000 genomes]
rs73902802	1.00[AMR][1000 genomes]
rs73905103	1.00[AMR][1000 genomes]
rs73905104	1.00[AMR][1000 genomes]
rs73905105	1.00[AMR][1000 genomes]
rs73905108	1.00[AMR][1000 genomes]
rs73905111	1.00[AMR][1000 genomes]
rs73905127	1.00[AMR][1000 genomes]
rs73905129	1.00[AMR][1000 genomes]
rs73905131	1.00[AMR][1000 genomes]
rs73905132	1.00[AMR][1000 genomes]
rs73905136	1.00[AMR][1000 genomes]
rs73905139	1.00[AMR][1000 genomes]
rs73905147	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv9793	chr20:23939613-24734850	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
2	esv3328348	chr20:24095746-24285830	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:24131600-24134600	Enhancers	Fetal Muscle Leg	muscle
2	chr20:24133800-24140000	Weak transcription	Fetal Muscle Trunk	muscle
3	chr20:24134000-24134400	Enhancers	H1 Cell Line	embryonic stem cell
4	chr20:24134000-24134400	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr20:24134200-24134400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr20:24134200-24134400	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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