The 2.0 version of rSNPBase

Variant report

Variant rs73927505
Chromosome Location chr2:33587309-33587310
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33529800-33609400 Weak transcription Right Ventricle heart
2 chr2:33548200-33588400 Weak transcription Colon Smooth Muscle Colon
3 chr2:33549000-33588800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:33558400-33592200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:33564200-33591600 Weak transcription Psoas Muscle Psoas
6 chr2:33565800-33590400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:33565800-33590400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr2:33570600-33587400 Weak transcription Fetal Heart heart
9 chr2:33570800-33588400 Weak transcription Rectal Smooth Muscle rectum
10 chr2:33571000-33590600 Weak transcription Brain Hippocampus Middle brain
11 chr2:33571600-33591600 Weak transcription Brain Substantia Nigra brain
12 chr2:33578800-33612200 Weak transcription Fetal Kidney kidney
13 chr2:33581000-33589600 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr2:33581400-33588400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr2:33581400-33588400 Weak transcription HUVEC blood vessel
16 chr2:33581400-33588800 Weak transcription A549 lung
17 chr2:33581400-33589000 Weak transcription NHLF lung
18 chr2:33581400-33589200 Weak transcription Fetal Lung lung
19 chr2:33581400-33590400 Weak transcription Ovary ovary
20 chr2:33581400-33590400 Weak transcription Pancreas Pancrea
21 chr2:33581400-33591000 Weak transcription Fetal Muscle Leg muscle
22 chr2:33581400-33591600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:33581400-33594400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr2:33581400-33602200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:33581600-33591600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr2:33581600-33592000 Weak transcription Placenta Placenta
27 chr2:33581600-33611400 Weak transcription Fetal Stomach stomach
28 chr2:33582200-33589000 Weak transcription Fetal Muscle Trunk muscle
29 chr2:33582400-33589000 Weak transcription Stomach Smooth Muscle stomach
30 chr2:33582400-33589600 Weak transcription Esophagus oesophagus
31 chr2:33582600-33588000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:33582600-33590400 Weak transcription Aorta Aorta
33 chr2:33582600-33590600 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr2:33582800-33601800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr2:33584000-33588000 Strong transcription Muscle Satellite Cultured Cells --
36 chr2:33584200-33593400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:33584400-33588400 Weak transcription NHDF-Ad bronchial
38 chr2:33585000-33588400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:33585400-33588400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:33585800-33591200 Strong transcription NH-A brain
41 chr2:33586000-33587600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:33586000-33588600 Weak transcription Liver Liver
43 chr2:33586000-33589200 Weak transcription Left Ventricle heart
44 chr2:33586000-33589600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:33586000-33591200 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr2:33586200-33589000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr2:33586200-33603600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr2:33586800-33588200 Weak transcription Osteobl bone
49 chr2:33587200-33589200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015