The 2.0 version of rSNPBase

Variant report

Variant rs73927508
Chromosome Location chr2:33588161-33588162
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33529800-33609400 Weak transcription Right Ventricle heart
2 chr2:33548200-33588400 Weak transcription Colon Smooth Muscle Colon
3 chr2:33549000-33588800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:33558400-33592200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:33564200-33591600 Weak transcription Psoas Muscle Psoas
6 chr2:33565800-33590400 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr2:33565800-33590400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr2:33570800-33588400 Weak transcription Rectal Smooth Muscle rectum
9 chr2:33571000-33590600 Weak transcription Brain Hippocampus Middle brain
10 chr2:33571600-33591600 Weak transcription Brain Substantia Nigra brain
11 chr2:33578800-33612200 Weak transcription Fetal Kidney kidney
12 chr2:33581000-33589600 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr2:33581400-33588400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr2:33581400-33588400 Weak transcription HUVEC blood vessel
15 chr2:33581400-33588800 Weak transcription A549 lung
16 chr2:33581400-33589000 Weak transcription NHLF lung
17 chr2:33581400-33589200 Weak transcription Fetal Lung lung
18 chr2:33581400-33590400 Weak transcription Ovary ovary
19 chr2:33581400-33590400 Weak transcription Pancreas Pancrea
20 chr2:33581400-33591000 Weak transcription Fetal Muscle Leg muscle
21 chr2:33581400-33591600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr2:33581400-33594400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr2:33581400-33602200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:33581600-33591600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr2:33581600-33592000 Weak transcription Placenta Placenta
26 chr2:33581600-33611400 Weak transcription Fetal Stomach stomach
27 chr2:33582200-33589000 Weak transcription Fetal Muscle Trunk muscle
28 chr2:33582400-33589000 Weak transcription Stomach Smooth Muscle stomach
29 chr2:33582400-33589600 Weak transcription Esophagus oesophagus
30 chr2:33582600-33590400 Weak transcription Aorta Aorta
31 chr2:33582600-33590600 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr2:33582800-33601800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:33584200-33593400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr2:33584400-33588400 Weak transcription NHDF-Ad bronchial
35 chr2:33585000-33588400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:33585400-33588400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr2:33585800-33591200 Strong transcription NH-A brain
38 chr2:33586000-33588600 Weak transcription Liver Liver
39 chr2:33586000-33589200 Weak transcription Left Ventricle heart
40 chr2:33586000-33589600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:33586000-33591200 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr2:33586200-33589000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr2:33586200-33603600 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr2:33586800-33588200 Weak transcription Osteobl bone
45 chr2:33587200-33589200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr2:33587400-33588200 Enhancers Fetal Heart heart
47 chr2:33587600-33589200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr2:33588000-33589400 Genic enhancers Muscle Satellite Cultured Cells --
49 chr2:33588000-33591800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015