The 2.0 version of rSNPBase

Variant report

Variant rs73929408
Chromosome Location chr2:33595898-33595899
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33529800-33609400 Weak transcription Right Ventricle heart
2 chr2:33578800-33612200 Weak transcription Fetal Kidney kidney
3 chr2:33581400-33602200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr2:33581600-33611400 Weak transcription Fetal Stomach stomach
5 chr2:33582800-33601800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr2:33586200-33603600 Weak transcription HUES48 Cell Line embryonic stem cell
7 chr2:33588400-33624400 Weak transcription Gastric stomach
8 chr2:33588800-33596000 Weak transcription Fetal Intestine Small intestine
9 chr2:33589200-33598000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:33589200-33623000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:33589600-33597600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:33590600-33615800 Weak transcription Fetal Muscle Trunk muscle
13 chr2:33590600-33624800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr2:33590800-33596000 Weak transcription Esophagus oesophagus
15 chr2:33590800-33612600 Weak transcription Ovary ovary
16 chr2:33591400-33616000 Weak transcription Colon Smooth Muscle Colon
17 chr2:33591800-33596000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr2:33591800-33601800 Weak transcription NHLF lung
19 chr2:33592000-33596200 Weak transcription Brain Angular Gyrus brain
20 chr2:33592000-33597000 Strong transcription Osteobl bone
21 chr2:33592000-33600200 Weak transcription Psoas Muscle Psoas
22 chr2:33592000-33624800 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:33592400-33601600 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr2:33593800-33598400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:33594400-33596400 Strong transcription Liver Liver
26 chr2:33594400-33596600 Strong transcription NH-A brain
27 chr2:33594400-33597200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr2:33594600-33596200 Strong transcription Aorta Aorta
29 chr2:33594800-33597000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
30 chr2:33594800-33597400 Strong transcription Stomach Smooth Muscle stomach
31 chr2:33595000-33596200 Strong transcription Muscle Satellite Cultured Cells --
32 chr2:33595000-33597000 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
33 chr2:33595200-33596000 Enhancers K562 blood
34 chr2:33595200-33601400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
35 chr2:33595200-33609200 Weak transcription Left Ventricle heart
36 chr2:33595400-33596000 Genic enhancers Fetal Muscle Leg muscle
37 chr2:33595400-33597600 Enhancers Brain Hippocampus Middle brain
38 chr2:33595600-33597000 Genic enhancers Fetal Heart heart
39 chr2:33595600-33597400 Enhancers Brain Inferior Temporal Lobe brain
40 chr2:33595600-33597400 Enhancers NHDF-Ad bronchial
41 chr2:33595800-33596200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:33595800-33596200 Enhancers Fetal Lung lung
43 chr2:33595800-33596400 Enhancers Brain Anterior Caudate brain
44 chr2:33595800-33597400 Enhancers Brain Cingulate Gyrus brain
45 chr2:33595800-33598000 Enhancers Brain Substantia Nigra brain

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Last update: Aug 31, 2015