Variant report

Variant	rs73934870
Chromosome Location	chr19:53229069-53229070
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MYC	chr19:53228800-53229196	K562	blood:	n/a	n/a
2	BHLHE40	chr19:53228364-53229160	K562	blood:	n/a	n/a
3	MAX	chr19:53228131-53229633	K562	blood:	n/a	n/a
4	E2F6	chr19:53228913-53229178	K562	blood:	n/a	chr19:53229068-53229078
5	CHD2	chr19:53228983-53229099	K562	blood:	n/a	n/a
6	RCOR1	chr19:53229032-53229137	K562	blood:	n/a	n/a
7	SIN3AK20	chr19:53228812-53229173	K562	blood:	n/a	n/a
8	USF1	chr19:53228701-53229186	K562	blood:	n/a	n/a
9	HDAC2	chr19:53228866-53229204	K562	blood:	n/a	n/a
10	MAX	chr19:53228245-53229214	K562	blood:	n/a	n/a
11	IRF1	chr19:53228716-53229134	K562	blood:	n/a	chr19:53229085-53229099
12	HMGN3	chr19:53228995-53229206	K562	blood:	n/a	n/a
13	ELF1	chr19:53228644-53229316	K562	blood:	n/a	chr19:53229136-53229148 chr19:53229007-53229018 chr19:53229008-53229017 chr19:53229007-53229018
14	YY1	chr19:53228884-53229210	K562	blood:	n/a	chr19:53229047-53229069
15	E2F6	chr19:53228255-53229209	K562	blood:	n/a	chr19:53229068-53229078 chr19:53228656-53228668
16	NR2F2	chr19:53228022-53229165	K562	blood:	n/a	n/a
17	TAF1	chr19:53228767-53229183	K562	blood:	n/a	n/a
18	POLR2A	chr19:53228207-53229266	K562	blood:	n/a	n/a
19	POLR2A	chr19:53228744-53229143	K562	blood:	n/a	n/a
20	USF1	chr19:53228824-53229246	K562	blood:	n/a	n/a
21	JUND	chr19:53228212-53229359	K562	blood:	n/a	chr19:53228703-53228714
22	MYC	chr19:53226945-53229224	K562	blood:	n/a	n/a
23	HEY1	chr19:53228373-53229092	K562	blood:	n/a	chr19:53228605-53228620
24	POLR2A	chr19:53228231-53229198	K562	blood:	n/a	n/a
25	POLR2A	chr19:53228297-53229142	K562	blood:	n/a	n/a
26	UBTF	chr19:53228297-53229196	K562	blood:	n/a	n/a
27	YY1	chr19:53228801-53229215	K562	blood:	n/a	chr19:53229047-53229069
28	ELF1	chr19:53228291-53229270	K562	blood:	n/a	chr19:53229136-53229148 chr19:53229007-53229018 chr19:53229008-53229017 chr19:53229007-53229018
29	RCOR1	chr19:53227746-53229352	K562	blood:	n/a	n/a
30	MAX	chr19:53228224-53229205	K562	blood:	n/a	n/a
31	ATF3	chr19:53228814-53229132	K562	blood:	n/a	n/a
32	POLR2A	chr19:53228998-53229707	GM12878	blood:	n/a	n/a
33	MYC	chr19:53228308-53229181	K562	blood:	n/a	n/a
34	ZBTB7A	chr19:53228862-53229232	K562	blood:	n/a	chr19:53229049-53229057
35	TBP	chr19:53228342-53229197	K562	blood:	n/a	chr19:53228892-53228903
36	MYC	chr19:53228167-53229225	K562	blood:	n/a	n/a
37	JUN	chr19:53228327-53229084	K562	blood:	n/a	chr19:53228703-53228714
38	MYC	chr19:53228034-53229247	K562	blood:	n/a	n/a
39	MXI1	chr19:53228554-53229176	K562	blood:	n/a	chr19:53228997-53229006
40	MAZ	chr19:53228350-53229321	K562	blood:	n/a	n/a
41	SPI1	chr19:53228860-53229093	K562	blood:	n/a	n/a
42	HEY1	chr19:53228273-53229388	K562	blood:	n/a	chr19:53228605-53228620
43	POLR2A	chr19:53228948-53229607	H1-hESC	embryonic stem cell:	n/a	n/a
44	EP300	chr19:53228712-53229145	K562	blood:	n/a	chr19:53229008-53229015
45	IRF1	chr19:53228033-53229134	K562	blood:	n/a	chr19:53228181-53228194 chr19:53228181-53228193 chr19:53228182-53228192 chr19:53228182-53228196 chr19:53228178-53228192 chr19:53228181-53228193 chr19:53228181-53228192 chr19:53228176-53228193 chr19:53229085-53229099
46	POLR2A	chr19:53228776-53229160	K562	blood:	n/a	n/a
47	POLR2A	chr19:53228214-53229307	K562	blood:	n/a	n/a
48	E2F6	chr19:53228279-53229276	K562	blood:	n/a	chr19:53229068-53229078 chr19:53228656-53228668
49	CBX3	chr19:53228183-53229250	K562	blood:	n/a	n/a
50	POLR2A	chr19:53226934-53229559	K562	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:53227642..53230112-chr19:53236849..53239461,2	K562	blood:
2	chr19:53227707..53230460-chr19:53236213..53239636,6	K562	blood:

Variant related genes	Relation type
ZNF611	TF binding region
ENSG00000213020	Chromatin interaction

Extended variants
information (count: 83 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs55821820	1.00[ASN][1000 genomes]
rs56100304	1.00[ASN][1000 genomes]
rs57845101	1.00[EUR][1000 genomes]
rs58076588	1.00[AMR][1000 genomes]
rs58333113	1.00[AMR][1000 genomes]
rs58539196	1.00[AMR][1000 genomes]
rs58660733	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59047182	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60089708	1.00[AMR][1000 genomes]
rs60756412	1.00[ASN][1000 genomes]
rs61407341	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61513079	1.00[AMR][1000 genomes]
rs7246970	1.00[ASN][1000 genomes]
rs7252551	1.00[AMR][1000 genomes]
rs7258734	1.00[AMR][1000 genomes]
rs7259934	1.00[ASN][1000 genomes]
rs73576374	1.00[ASN][1000 genomes]
rs73582507	1.00[AMR][1000 genomes]
rs73934855	1.00[ASN][1000 genomes]
rs73934865	1.00[AMR][1000 genomes]
rs73934873	1.00[AMR][1000 genomes]
rs73934884	1.00[AMR][1000 genomes]
rs73934886	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73934889	1.00[AMR][1000 genomes]
rs73934890	1.00[AMR][1000 genomes]
rs8103512	1.00[AMR][1000 genomes]
rs8103708	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8104229	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8104332	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8106892	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8107104	1.00[AMR][1000 genomes]
rs8112220	1.00[AMR][1000 genomes]
rs8113671	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9749560	1.00[AMR][1000 genomes]
rs9749577	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1057296	chr19:52950339-53396986	Weak transcription Active TSS ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
2	nsv833874	chr19:53058014-53257875	Weak transcription ZNF genes & repeats Active TSS Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
3	nsv912305	chr19:53092465-53349850	Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
4	nsv912306	chr19:53092465-53400760	Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
5	nsv912307	chr19:53092465-53433054	Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
6	nsv912308	chr19:53092465-53436337	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
7	nsv912309	chr19:53092465-53440653	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
8	nsv912310	chr19:53092465-53451291	Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
9	nsv912312	chr19:53103875-53296371	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
10	nsv912313	chr19:53103875-53436337	ZNF genes & repeats Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
11	nsv912317	chr19:53105547-53440653	Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
12	nsv1066762	chr19:53112568-53552217	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
13	nsv912318	chr19:53118278-53451291	Strong transcription ZNF genes & repeats Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
14	nsv458744	chr19:53120559-53236331	Genic enhancers Strong transcription Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
15	nsv580028	chr19:53120559-53236331	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
16	esv3489404	chr19:53121944-53391394	ZNF genes & repeats Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
17	esv3489405	chr19:53121944-53391394	Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
18	nsv432072	chr19:53144788-53554388	Strong transcription ZNF genes & repeats Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
19	esv3401212	chr19:53151131-53482063	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
20	nsv912319	chr19:53152923-53241107	Strong transcription Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases
21	nsv912320	chr19:53164172-53243026	Enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
22	nsv912321	chr19:53186836-53451291	Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
23	nsv1058903	chr19:53193570-53489633	Weak transcription Active TSS Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
24	nsv1067280	chr19:53193570-53567287	Active TSS Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	nsv544062	chr19:53193570-53567287	ZNF genes & repeats Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
26	nsv580030	chr19:53194344-53547394	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
27	nsv1067557	chr19:53195426-53319092	Enhancers Active TSS ZNF genes & repeats Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
28	nsv1057118	chr19:53195426-53480449	Strong transcription Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
29	esv2599883	chr19:53199036-53262483	ZNF genes & repeats Enhancers Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
30	nsv1065345	chr19:53199614-53254617	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
31	esv3331661	chr19:53200023-53262312	Active TSS Flanking Active TSS Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
32	esv7362	chr19:53204293-53265963	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
33	nsv1062976	chr19:53205373-53274297	Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
34	esv3388532	chr19:53206027-53266994	Weak transcription Active TSS Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
35	nsv470152	chr19:53207182-53249348	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
36	nsv458745	chr19:53207182-53274396	ZNF genes & repeats Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
37	nsv580031	chr19:53207182-53274396	Genic enhancers Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
38	nsv530807	chr19:53210488-53695881	Strong transcription Active TSS Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
39	nsv833875	chr19:53211335-53391459	Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
40	esv3363127	chr19:53212333-53273987	ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
41	nsv1061338	chr19:53212361-53253763	Strong transcription Active TSS Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
42	nsv912322	chr19:53212361-53267506	Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
43	nsv1063862	chr19:53213111-53254617	Strong transcription Weak transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
44	esv3350085	chr19:53213910-53275524	Flanking Active TSS Strong transcription Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
45	nsv1055617	chr19:53223123-53274297	ZNF genes & repeats Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
46	esv3319157	chr19:53225543-53236310	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
47	esv3319158	chr19:53225543-53236310	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
48	nsv961239	chr19:53228968-53233081	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53210400-53236600	Weak transcription	Psoas Muscle	Psoas
2	chr19:53210600-53237200	Weak transcription	NHDF-Ad	bronchial
3	chr19:53212400-53231000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
4	chr19:53214800-53237200	Weak transcription	Stomach Mucosa	stomach
5	chr19:53215800-53237000	Weak transcription	Brain Angular Gyrus	brain
6	chr19:53216000-53230000	Weak transcription	HSMM	muscle
7	chr19:53216400-53230800	Weak transcription	Colon Smooth Muscle	Colon
8	chr19:53216600-53230600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr19:53216800-53236600	Weak transcription	Brain Cingulate Gyrus	brain
10	chr19:53217400-53230200	Weak transcription	Small Intestine	intestine
11	chr19:53217600-53229800	Weak transcription	Brain Substantia Nigra	brain
12	chr19:53218800-53230000	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr19:53219600-53230000	Weak transcription	Primary B cells from cord blood	blood
14	chr19:53220600-53231400	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
15	chr19:53221000-53237400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr19:53223400-53232200	ZNF genes & repeats	Primary monocytes fromperipheralblood	blood
17	chr19:53223600-53229600	Strong transcription	Primary T helper cells PMA-I stimulated	--
18	chr19:53224000-53232400	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr19:53224400-53230000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr19:53225000-53236800	Weak transcription	Brain Hippocampus Middle	brain
21	chr19:53225200-53230000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr19:53225200-53230600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
23	chr19:53225200-53230600	Weak transcription	Fetal Lung	lung
24	chr19:53225200-53232400	Strong transcription	Primary T cells fromperipheralblood	blood
25	chr19:53225200-53236600	Weak transcription	Brain Inferior Temporal Lobe	brain
26	chr19:53225200-53237000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr19:53225200-53237200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr19:53225200-53237200	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr19:53225400-53230000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr19:53225400-53230600	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr19:53225400-53231200	Weak transcription	Rectal Smooth Muscle	rectum
32	chr19:53225400-53233400	Strong transcription	Primary B cells from peripheral blood	blood
33	chr19:53225400-53236600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr19:53225400-53237200	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr19:53226000-53229200	Strong transcription	Duodenum Smooth Muscle	Duodenum
36	chr19:53226000-53229600	Genic enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr19:53226000-53232800	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr19:53226200-53230000	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr19:53226200-53231800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
40	chr19:53226200-53231800	Strong transcription	Primary T cells from cord blood	blood
41	chr19:53226200-53231800	Strong transcription	Thymus	Thymus
42	chr19:53226200-53232000	Strong transcription	Fetal Muscle Leg	muscle
43	chr19:53226200-53232200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
44	chr19:53226200-53237200	Weak transcription	HUVEC	blood vessel
45	chr19:53226200-53237200	Weak transcription	Osteobl	bone
46	chr19:53226400-53230400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
47	chr19:53226400-53230800	Weak transcription	NHEK	skin
48	chr19:53226400-53231400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
49	chr19:53226400-53237200	Weak transcription	HMEC	breast
50	chr19:53226600-53229200	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin

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