Variant report

Variant	rs73936831
Chromosome Location	chr2:55322080-55322081
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:55322057..55324846-chr2:55364507..55366032,2	K562	blood:
2	chr2:55315251..55317504-chr2:55320953..55322890,2	MCF-7	breast:

rs_ID	r²[population]
rs11886358	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11887112	1.00[EUR][1000 genomes]
rs11889466	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11890896	1.00[EUR][1000 genomes]
rs11896438	1.00[EUR][1000 genomes]
rs11902622	1.00[EUR][1000 genomes]
rs17046771	1.00[EUR][1000 genomes]
rs2972077	1.00[EUR][1000 genomes]
rs55735105	1.00[EUR][1000 genomes]
rs56219595	1.00[EUR][1000 genomes]
rs58016152	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60944260	1.00[EUR][1000 genomes]
rs61197615	1.00[EUR][1000 genomes]
rs6707902	1.00[EUR][1000 genomes]
rs6716121	1.00[EUR][1000 genomes]
rs6723598	1.00[EUR][1000 genomes]
rs6724153	1.00[EUR][1000 genomes]
rs6736539	1.00[EUR][1000 genomes]
rs73936834	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73936837	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73936845	1.00[EUR][1000 genomes]
rs73936947	1.00[EUR][1000 genomes]
rs73936949	1.00[EUR][1000 genomes]
rs73936959	1.00[EUR][1000 genomes]
rs7596403	1.00[EUR][1000 genomes]

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55315400-55323600	Weak transcription	HSMMtube	muscle
2	chr2:55316000-55322800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr2:55316000-55323800	Weak transcription	NHDF-Ad	bronchial
4	chr2:55316800-55327200	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr2:55317200-55323800	Weak transcription	Fetal Muscle Leg	muscle
6	chr2:55318400-55323600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr2:55318400-55323600	Weak transcription	Hela-S3	cervix
8	chr2:55318400-55329600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr2:55318600-55322800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr2:55319400-55322200	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr2:55319600-55322200	Enhancers	HUVEC	blood vessel
12	chr2:55319600-55322400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr2:55319800-55324600	Weak transcription	Fetal Intestine Small	intestine
14	chr2:55320000-55327200	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr2:55320200-55323800	Weak transcription	Stomach Mucosa	stomach
16	chr2:55320400-55323800	Weak transcription	Psoas Muscle	Psoas
17	chr2:55321000-55323600	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr2:55321000-55323600	Weak transcription	Fetal Heart	heart
19	chr2:55321000-55323800	Weak transcription	NH-A	brain
20	chr2:55321000-55324000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr2:55321000-55324600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr2:55321000-55326600	Weak transcription	HMEC	breast
23	chr2:55321200-55322400	Enhancers	Lung	lung
24	chr2:55321400-55326400	Weak transcription	Primary B cells from cord blood	blood
25	chr2:55321600-55323600	Weak transcription	K562	blood
26	chr2:55321600-55323600	Weak transcription	Osteobl	bone
27	chr2:55321600-55323800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr2:55321600-55323800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr2:55321600-55323800	Weak transcription	A549	lung
30	chr2:55321600-55325000	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr2:55321600-55327400	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr2:55321600-55339400	Weak transcription	Thymus	Thymus
33	chr2:55321800-55323600	Weak transcription	NHLF	lung
34	chr2:55321800-55324000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
35	chr2:55321800-55324600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr2:55321800-55324600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr2:55321800-55336400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr2:55322000-55322200	Enhancers	Brain Anterior Caudate	brain
39	chr2:55322000-55323800	Weak transcription	Brain Angular Gyrus	brain
40	chr2:55322000-55323800	Weak transcription	Brain Cingulate Gyrus	brain
41	chr2:55322000-55323800	Weak transcription	Brain Hippocampus Middle	brain
42	chr2:55322000-55323800	Weak transcription	Brain Inferior Temporal Lobe	brain
43	chr2:55322000-55323800	Weak transcription	Brain Substantia Nigra	brain
44	chr2:55322000-55324000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr2:55322000-55324200	Weak transcription	Primary monocytes fromperipheralblood	blood
46	chr2:55322000-55324600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr2:55322000-55324800	Weak transcription	HUES64 Cell Line	embryonic stem cell
48	chr2:55322000-55326600	Weak transcription	Primary hematopoietic stem cells	blood
49	chr2:55322000-55326600	Weak transcription	NHEK	skin

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