The 2.0 version of rSNPBase

Variant report

Variant rs73936959
Chromosome Location chr2:55437711-55437712
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55397200-55450000 Weak transcription NH-A brain
2 chr2:55402800-55450000 Weak transcription NHDF-Ad bronchial
3 chr2:55415400-55450000 Weak transcription GM12878-XiMat blood
4 chr2:55416800-55450000 Weak transcription Rectal Smooth Muscle rectum
5 chr2:55417400-55450200 Weak transcription Placenta Placenta
6 chr2:55417800-55439200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr2:55417800-55450000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr2:55423200-55438800 Weak transcription iPS-18 Cell Line embryonic stem cell
9 chr2:55423800-55448000 Weak transcription HSMM muscle
10 chr2:55424200-55450000 Weak transcription Muscle Satellite Cultured Cells --
11 chr2:55424400-55442200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr2:55424600-55442800 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr2:55424600-55449800 Weak transcription Thymus Thymus
14 chr2:55424600-55450000 Weak transcription Brain Inferior Temporal Lobe brain
15 chr2:55424600-55450200 Weak transcription Brain Germinal Matrix brain
16 chr2:55424600-55451200 Weak transcription HepG2 liver
17 chr2:55424800-55450200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr2:55425600-55449800 Weak transcription Fetal Muscle Trunk muscle
19 chr2:55427400-55450200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:55427400-55450200 Weak transcription Aorta Aorta
21 chr2:55427400-55450600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr2:55427400-55450600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr2:55428800-55439400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr2:55429200-55449800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:55430000-55437800 Weak transcription Fetal Intestine Large intestine
26 chr2:55430000-55443200 Weak transcription Fetal Intestine Small intestine
27 chr2:55430000-55450400 Weak transcription Left Ventricle heart
28 chr2:55431000-55439400 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr2:55432000-55449800 Weak transcription Primary hematopoietic stem cells blood
30 chr2:55432000-55451200 Weak transcription Dnd41 blood
31 chr2:55432200-55450000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:55432600-55448800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr2:55432800-55450000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr2:55432800-55450000 Weak transcription Fetal Stomach stomach
35 chr2:55433000-55444600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr2:55433000-55448800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:55433000-55448800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr2:55433000-55449800 Weak transcription Pancreas Pancrea
39 chr2:55433000-55450200 Weak transcription Ovary ovary
40 chr2:55433400-55450000 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr2:55433600-55448200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr2:55433600-55448600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr2:55437000-55441800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015