Variant report

Variant	rs74061059
Chromosome Location	chr14:70588237-70588238
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs55773989	1.00[AFR][1000 genomes]
rs55821105	1.00[AFR][1000 genomes]
rs59121892	1.00[AFR][1000 genomes]
rs59535814	0.93[AFR][1000 genomes]
rs61591260	1.00[AFR][1000 genomes]
rs74061063	1.00[AFR][1000 genomes]
rs74061065	1.00[AFR][1000 genomes]
rs74061067	1.00[AFR][1000 genomes]
rs74062803	1.00[AFR][1000 genomes]
rs74062805	1.00[AFR][1000 genomes]
rs74062809	1.00[AFR][1000 genomes]
rs74062811	1.00[AFR][1000 genomes]
rs74062812	1.00[AFR][1000 genomes]
rs74062818	1.00[AFR][1000 genomes]
rs74062819	1.00[AFR][1000 genomes]
rs74062820	1.00[AFR][1000 genomes]
rs74062822	1.00[AFR][1000 genomes]
rs74062823	1.00[AFR][1000 genomes]
rs74062828	1.00[AFR][1000 genomes]
rs74062831	1.00[AFR][1000 genomes]
rs74063894	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70579800-70599400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr14:70583400-70588600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr14:70583600-70599600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr14:70585600-70589200	Enhancers	Psoas Muscle	Psoas
5	chr14:70586600-70589400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:70586800-70589000	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr14:70586800-70589200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr14:70587200-70589000	Enhancers	H1 Cell Line	embryonic stem cell
9	chr14:70587200-70589200	Enhancers	HUES48 Cell Line	embryonic stem cell
10	chr14:70587200-70589200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr14:70587200-70589400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr14:70587800-70589400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr14:70588000-70588400	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
14	chr14:70588000-70588800	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr14:70588000-70589000	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr14:70588000-70589000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr14:70588000-70589000	Enhancers	Brain Angular Gyrus	brain
18	chr14:70588000-70589000	Enhancers	Fetal Brain Female	brain
19	chr14:70588000-70589200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr14:70588000-70589200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr14:70588000-70589400	Enhancers	H9 Cell Line	embryonic stem cell
22	chr14:70588000-70589400	Enhancers	iPS-18 Cell Line	embryonic stem cell
23	chr14:70588000-70589400	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr14:70588200-70589000	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr14:70588200-70589200	Enhancers	Fetal Brain Male	brain

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