The 2.0 version of rSNPBase

Variant report

Variant rs74088351
Chromosome Location chr12:39722266-39722267
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:39686600-39722400 Weak transcription GM12878-XiMat blood
2 chr12:39686600-39725400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr12:39686800-39729800 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr12:39686800-39738800 Weak transcription Pancreas Pancrea
5 chr12:39687200-39726400 Weak transcription Fetal Intestine Small intestine
6 chr12:39687600-39723800 Weak transcription Duodenum Mucosa Duodenum
7 chr12:39688400-39724600 Weak transcription Esophagus oesophagus
8 chr12:39688400-39726400 Weak transcription Aorta Aorta
9 chr12:39689000-39724000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr12:39689600-39725400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr12:39695000-39726400 Weak transcription Fetal Intestine Large intestine
12 chr12:39695000-39726400 Weak transcription HepG2 liver
13 chr12:39695600-39724000 Weak transcription Brain Inferior Temporal Lobe brain
14 chr12:39695600-39742000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
15 chr12:39696600-39762200 Weak transcription Fetal Brain Male brain
16 chr12:39697800-39771800 Weak transcription Fetal Kidney kidney
17 chr12:39698000-39724400 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr12:39698200-39724400 Weak transcription K562 blood
19 chr12:39698600-39724000 Weak transcription Brain Anterior Caudate brain
20 chr12:39698600-39724000 Weak transcription Brain Substantia Nigra brain
21 chr12:39698600-39725200 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr12:39698600-39725400 Weak transcription Brain Hippocampus Middle brain
23 chr12:39699600-39724600 Weak transcription Brain Angular Gyrus brain
24 chr12:39699600-39760600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
25 chr12:39700600-39723400 Weak transcription Adipose Nuclei Adipose
26 chr12:39700600-39724000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr12:39700800-39724000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr12:39701000-39726400 Weak transcription Left Ventricle heart
29 chr12:39701400-39724000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr12:39701600-39723800 Weak transcription Primary T cells fromperipheralblood blood
31 chr12:39701600-39723800 Weak transcription Brain Cingulate Gyrus brain
32 chr12:39701600-39724000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr12:39701600-39725000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr12:39701800-39724400 Weak transcription HMEC breast
35 chr12:39704200-39746200 Weak transcription HUVEC blood vessel
36 chr12:39704600-39723200 Weak transcription NHEK skin
37 chr12:39710800-39724800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr12:39711200-39726400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:39711800-39724000 Weak transcription Placenta Placenta
40 chr12:39711800-39724000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr12:39711800-39724000 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr12:39712200-39724000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr12:39713400-39722400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr12:39713800-39725400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr12:39714800-39727000 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr12:39715600-39741800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr12:39717200-39724200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr12:39717800-39722600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr12:39717800-39724800 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr12:39717800-39727400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015