Variant report

Variant	rs74159181
Chromosome Location	chr10:119093772-119093773
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:119091902..119094028-chr10:119134519..119136628,2	K562	blood:
2	chr10:119088241..119091090-chr10:119093377..119096117,2	MCF-7	breast:
3	chr10:119093017..119095795-chr10:119096896..119099742,2	K562	blood:
4	chr10:119093147..119095876-chr10:119096852..119099544,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165650	Chromatin interaction

rs_ID	r²[population]
rs3026068	0.83[AFR][1000 genomes]
rs363286	0.83[AFR][1000 genomes]
rs363290	0.83[AFR][1000 genomes]
rs363292	0.83[AFR][1000 genomes]
rs363297	0.83[AFR][1000 genomes]
rs55698419	1.00[AFR][1000 genomes]
rs56311829	0.91[AFR][1000 genomes]
rs56382679	0.91[AFR][1000 genomes]
rs56962759	1.00[AFR][1000 genomes]
rs57112183	1.00[AFR][1000 genomes]
rs58653554	1.00[AFR][1000 genomes]
rs59381469	1.00[AFR][1000 genomes]
rs59858809	1.00[AFR][1000 genomes]
rs59968623	1.00[AFR][1000 genomes]
rs61515506	1.00[AFR][1000 genomes]
rs74159162	0.83[AFR][1000 genomes]
rs74159163	0.83[AFR][1000 genomes]
rs74159182	1.00[AFR][1000 genomes]
rs74159183	1.00[AFR][1000 genomes]
rs74159193	1.00[AFR][1000 genomes]
rs74159195	1.00[AFR][1000 genomes]
rs74159196	1.00[AFR][1000 genomes]
rs74159198	1.00[AFR][1000 genomes]
rs74159199	1.00[AFR][1000 genomes]
rs74162306	0.91[AFR][1000 genomes]

Chromatin state (count:84 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119041400-119101200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
2	chr10:119043000-119094400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr10:119049800-119100600	Weak transcription	Stomach Smooth Muscle	stomach
4	chr10:119049800-119101400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr10:119049800-119102400	Weak transcription	Rectal Smooth Muscle	rectum
6	chr10:119050000-119093800	Weak transcription	Primary T cells fromperipheralblood	blood
7	chr10:119050000-119101600	Weak transcription	Duodenum Smooth Muscle	Duodenum
8	chr10:119063800-119113200	Weak transcription	Fetal Thymus	thymus
9	chr10:119064600-119098000	Weak transcription	HMEC	breast
10	chr10:119066800-119111600	Weak transcription	Colonic Mucosa	Colon
11	chr10:119069200-119094200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
12	chr10:119069400-119104400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr10:119069600-119093800	Weak transcription	Thymus	Thymus
14	chr10:119069600-119095200	Weak transcription	Ovary	ovary
15	chr10:119070400-119094600	Weak transcription	Primary T helper cells PMA-I stimulated	--
16	chr10:119071600-119099200	Weak transcription	NH-A	brain
17	chr10:119071600-119106000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
18	chr10:119071800-119099200	Weak transcription	Hela-S3	cervix
19	chr10:119072000-119111200	Weak transcription	Aorta	Aorta
20	chr10:119072200-119095200	Weak transcription	Sigmoid Colon	Sigmoid Colon
21	chr10:119074400-119093800	Weak transcription	Primary T helper cells fromperipheralblood	blood
22	chr10:119074600-119093800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr10:119076200-119099800	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr10:119076400-119104800	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr10:119076600-119095000	Weak transcription	Primary monocytes fromperipheralblood	blood
26	chr10:119078000-119101400	Weak transcription	NHDF-Ad	bronchial
27	chr10:119078200-119093800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr10:119078200-119104400	Weak transcription	HSMM	muscle
29	chr10:119079000-119101800	Weak transcription	NHEK	skin
30	chr10:119079400-119099200	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr10:119082200-119099800	Weak transcription	H9 Cell Line	embryonic stem cell
32	chr10:119082400-119093800	Weak transcription	Left Ventricle	heart
33	chr10:119082400-119118600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr10:119082600-119102000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr10:119083400-119104600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
36	chr10:119083600-119098800	Weak transcription	Colon Smooth Muscle	Colon
37	chr10:119085600-119102000	Weak transcription	Pancreas	Pancrea
38	chr10:119086000-119102000	Weak transcription	Gastric	stomach
39	chr10:119086200-119099200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
40	chr10:119086400-119097200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
41	chr10:119086400-119099000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
42	chr10:119086800-119095200	Weak transcription	HepG2	liver
43	chr10:119086800-119098800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr10:119086800-119099200	Weak transcription	Duodenum Mucosa	Duodenum
45	chr10:119087000-119093800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
46	chr10:119087000-119093800	Weak transcription	Monocytes-CD14+_RO01746	blood
47	chr10:119087000-119094400	Weak transcription	Primary T cells from cord blood	blood
48	chr10:119087000-119097800	Weak transcription	Fetal Kidney	kidney
49	chr10:119087000-119100600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
50	chr10:119087200-119094800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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