Variant report

Variant	rs74159182
Chromosome Location	chr10:119107884-119107885
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:119106210..119108096-chr10:119110462..119113410,2	MCF-7	breast:

rs_ID	r²[population]
rs3026068	0.83[AFR][1000 genomes]
rs363286	0.83[AFR][1000 genomes]
rs363290	0.83[AFR][1000 genomes]
rs363292	0.83[AFR][1000 genomes]
rs363297	0.83[AFR][1000 genomes]
rs55698419	1.00[AFR][1000 genomes]
rs56311829	0.91[AFR][1000 genomes]
rs56382679	0.91[AFR][1000 genomes]
rs56962759	1.00[AFR][1000 genomes]
rs57112183	1.00[AFR][1000 genomes]
rs58653554	1.00[AFR][1000 genomes]
rs59381469	1.00[AFR][1000 genomes]
rs59858809	1.00[AFR][1000 genomes]
rs59968623	1.00[AFR][1000 genomes]
rs61515506	1.00[AFR][1000 genomes]
rs74159162	0.83[AFR][1000 genomes]
rs74159163	0.83[AFR][1000 genomes]
rs74159181	1.00[AFR][1000 genomes]
rs74159183	1.00[AFR][1000 genomes]
rs74159193	1.00[AFR][1000 genomes]
rs74159195	1.00[AFR][1000 genomes]
rs74159196	1.00[AFR][1000 genomes]
rs74159198	1.00[AFR][1000 genomes]
rs74159199	1.00[AFR][1000 genomes]
rs74162306	0.91[AFR][1000 genomes]

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119063800-119113200	Weak transcription	Fetal Thymus	thymus
2	chr10:119066800-119111600	Weak transcription	Colonic Mucosa	Colon
3	chr10:119072000-119111200	Weak transcription	Aorta	Aorta
4	chr10:119082400-119118600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr10:119094000-119113200	Weak transcription	Thymus	Thymus
6	chr10:119094200-119108600	Weak transcription	Fetal Muscle Trunk	muscle
7	chr10:119095000-119113200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
8	chr10:119095600-119112200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr10:119095600-119113400	Weak transcription	Brain Cingulate Gyrus	brain
10	chr10:119096800-119112000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
11	chr10:119097000-119112000	Weak transcription	Brain Anterior Caudate	brain
12	chr10:119097000-119114600	Weak transcription	Brain Hippocampus Middle	brain
13	chr10:119099600-119108400	Weak transcription	Colon Smooth Muscle	Colon
14	chr10:119099800-119114800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
15	chr10:119100000-119114800	Weak transcription	Fetal Heart	heart
16	chr10:119100200-119109400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr10:119100200-119131000	Weak transcription	Fetal Muscle Leg	muscle
18	chr10:119101000-119112800	Weak transcription	Dnd41	blood
19	chr10:119102200-119112800	Weak transcription	Primary B cells from cord blood	blood
20	chr10:119102400-119110600	Weak transcription	Primary B cells from peripheral blood	blood
21	chr10:119102400-119114600	Weak transcription	Spleen	Spleen
22	chr10:119102400-119131400	Weak transcription	Psoas Muscle	Psoas
23	chr10:119102600-119108000	Weak transcription	Left Ventricle	heart
24	chr10:119102600-119109000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr10:119102600-119113400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr10:119102600-119113400	Weak transcription	Brain Angular Gyrus	brain
27	chr10:119102600-119119000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr10:119102800-119119600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
29	chr10:119102800-119123600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr10:119103000-119108000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr10:119104400-119108000	Weak transcription	Esophagus	oesophagus
32	chr10:119104400-119109400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr10:119104600-119108000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr10:119104600-119108000	Weak transcription	Lung	lung
35	chr10:119104600-119109000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr10:119105000-119108000	Enhancers	K562	blood
37	chr10:119105000-119109000	Weak transcription	Right Atrium	heart
38	chr10:119105000-119110400	Weak transcription	GM12878-XiMat	blood
39	chr10:119105000-119111200	Weak transcription	Primary T cells fromperipheralblood	blood
40	chr10:119105000-119115000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr10:119105000-119118400	Weak transcription	Ovary	ovary
42	chr10:119105000-119119600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr10:119105200-119108200	Weak transcription	Primary monocytes fromperipheralblood	blood
44	chr10:119105200-119108600	Weak transcription	Primary hematopoietic stem cells	blood
45	chr10:119105200-119110400	Weak transcription	Pancreatic Islets	Pancreatic Islet
46	chr10:119105200-119112000	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr10:119105200-119113400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
48	chr10:119105400-119108200	Weak transcription	Monocytes-CD14+_RO01746	blood
49	chr10:119105400-119110400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
50	chr10:119105400-119110800	Weak transcription	Liver	Liver

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