Variant report

Variant	rs742300
Chromosome Location	chr6:133688952-133688953
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10484669	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1336520	0.88[CEU][hapmap]
rs1886983	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1998836	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2095602	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2095603	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2223435	1.00[CEU][hapmap]
rs34751763	0.81[ASN][1000 genomes]
rs3777804	1.00[CEU][hapmap]
rs62428663	1.00[AFR][1000 genomes]
rs62428668	0.82[ASN][1000 genomes]
rs62428724	0.82[ASN][1000 genomes]
rs62428725	0.84[ASN][1000 genomes]
rs62428726	0.84[ASN][1000 genomes]
rs714178	1.00[CEU][hapmap];0.86[JPT][hapmap];0.90[AMR][1000 genomes]
rs73559612	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73559615	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7760570	0.93[CEU][hapmap]
rs9373043	0.82[CEU][hapmap]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133674000-133689800	Weak transcription	A549	lung
2	chr6:133684600-133717800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:133687600-133690800	Enhancers	Hela-S3	cervix
4	chr6:133687800-133690400	Enhancers	Skeletal Muscle Male	skeletal muscle
5	chr6:133688000-133689200	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:133688400-133689600	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr6:133688400-133691000	Weak transcription	Psoas Muscle	Psoas
8	chr6:133688600-133691000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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