Variant report

Variant	rs7429523
Chromosome Location	chr3:144888500-144888501
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:33 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1005754	chr3:144529346-144984363	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1004792	chr3:144658885-145191801	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv877579	chr3:144815506-144933621	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv877580	chr3:144815506-144979382	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
5	nsv877581	chr3:144815506-145181910	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv998288	chr3:144815560-145147528	Enhancers Bivalent Enhancer Weak transcription Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
7	nsv591931	chr3:144850047-144928287	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv877582	chr3:144871811-144916414	Enhancers Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv1848157	chr3:144880588-144903957	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv1848561	chr3:144880588-144903957	Active TSS Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv877583	chr3:144880588-145066106	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv1014348	chr3:144880711-144954785	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv536756	chr3:144880711-144954785	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv3436784	chr3:144886562-144890860	Enhancers	n/a	n/a	inside rSNPs	diseases
15	esv3380946	chr3:144887262-144890060	Enhancers	n/a	n/a	inside rSNPs	diseases
16	esv3523349	chr3:144887712-144889935	Enhancers	n/a	n/a	inside rSNPs	diseases
17	esv3373365	chr3:144888250-144888994	Enhancers	n/a	n/a	inside rSNPs	diseases
18	esv2584140	chr3:144888274-144889746	Enhancers	n/a	n/a	inside rSNPs	diseases
19	esv2108306	chr3:144888275-144889106	Enhancers	n/a	n/a	inside rSNPs	diseases
20	esv3462616	chr3:144888313-144889009	Enhancers	n/a	n/a	inside rSNPs	diseases
21	esv3523345	chr3:144888334-144889022	Enhancers	n/a	n/a	inside rSNPs	diseases
22	esv3523344	chr3:144888339-144888999	Enhancers	n/a	n/a	inside rSNPs	diseases
23	esv3523348	chr3:144888361-144888951	Enhancers	n/a	n/a	inside rSNPs	diseases
24	esv3523343	chr3:144888363-144888948	Enhancers	n/a	n/a	inside rSNPs	diseases
25	esv3462617	chr3:144888369-144888984	Enhancers	n/a	n/a	inside rSNPs	diseases
26	esv3462614	chr3:144888383-144888938	Enhancers	n/a	n/a	inside rSNPs	diseases
27	esv3523346	chr3:144888389-144888960	Enhancers	n/a	n/a	inside rSNPs	diseases
28	esv3523350	chr3:144888391-144888960	Enhancers	n/a	n/a	inside rSNPs	diseases
29	esv3416969	chr3:144888411-144888930	Enhancers	n/a	n/a	inside rSNPs	diseases
30	esv3462615	chr3:144888436-144888915	Enhancers	n/a	n/a	inside rSNPs	diseases
31	esv3523347	chr3:144888448-144888910	Enhancers	n/a	n/a	inside rSNPs	diseases
32	esv3462620	chr3:144888450-144888911	Enhancers	n/a	n/a	inside rSNPs	diseases
33	esv3523351	chr3:144888450-144888911	Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:144887600-144888600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr3:144887600-144888600	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr3:144887600-144890000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links