The 2.0 version of rSNPBase

Variant report

Variant rs7430290
Chromosome Location chr3:145965689-145965690
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:145948000-145967800 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:145953200-145968000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:145954600-145967800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:145956800-145966600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr3:145958000-145966000 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr3:145959400-145966400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:145960000-145966400 Weak transcription Ovary ovary
8 chr3:145960200-145967800 Weak transcription Muscle Satellite Cultured Cells --
9 chr3:145960400-145967800 Weak transcription Fetal Intestine Large intestine
10 chr3:145960800-145967800 Weak transcription Primary hematopoietic stem cells blood
11 chr3:145960800-145967800 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr3:145961800-145966200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr3:145962200-145965800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr3:145962600-145966200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr3:145963000-145966200 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr3:145963000-145966200 Weak transcription NHDF-Ad bronchial
17 chr3:145963000-145967800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr3:145963200-145965800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr3:145963600-145966200 Enhancers Fetal Lung lung
20 chr3:145964000-145968200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr3:145964800-145966200 Weak transcription Colon Smooth Muscle Colon
22 chr3:145965000-145966200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr3:145965200-145966400 Weak transcription A549 lung
24 chr3:145965400-145965800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
25 chr3:145965400-145965800 Enhancers Pancreas Pancrea
26 chr3:145965400-145966200 Enhancers Fetal Stomach stomach
27 chr3:145965400-145966600 Enhancers Adipose Nuclei Adipose
28 chr3:145965400-145966600 Enhancers Liver Liver
29 chr3:145965400-145967200 Flanking Active TSS HUVEC blood vessel
30 chr3:145965400-145969800 Active TSS Right Atrium heart
31 chr3:145965600-145965800 Enhancers iPS-18 Cell Line embryonic stem cell
32 chr3:145965600-145965800 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:145965600-145966800 Enhancers Rectal Smooth Muscle rectum
34 chr3:145965600-145967800 Enhancers Hela-S3 cervix
35 chr3:145965600-145968200 Weak transcription Lung lung
36 chr3:145965600-145969200 Active TSS Aorta Aorta

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Last update: Aug 31, 2015