Variant report

Variant	rs7441939
Chromosome Location	chr4:147903392-147903393
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10024453	1.00[EUR][1000 genomes]
rs17022199	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17022252	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17022256	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17022278	1.00[CEU][hapmap];0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17022283	1.00[EUR][1000 genomes]
rs17022290	1.00[EUR][1000 genomes]
rs17022301	1.00[EUR][1000 genomes]
rs17022338	1.00[EUR][1000 genomes]
rs17022379	1.00[EUR][1000 genomes]
rs17022394	1.00[EUR][1000 genomes]
rs17022406	0.94[EUR][1000 genomes]
rs1866017	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28377394	0.94[EUR][1000 genomes]
rs28633372	1.00[EUR][1000 genomes]
rs57807775	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58681766	0.87[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59505824	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147898200-147905800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:147902600-147903400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
3	chr4:147902600-147903400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr4:147902600-147903400	Enhancers	Muscle Satellite Cultured Cells	--
5	chr4:147902800-147903400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr4:147902800-147903400	Enhancers	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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