Variant report

Variant	rs7516373
Chromosome Location	chr1:220633286-220633287
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12562165	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap]
rs12562172	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap]
rs12562686	0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12568872	1.00[CEU][hapmap];0.86[CHB][hapmap];0.82[JPT][hapmap]
rs12568969	1.00[JPT][hapmap]
rs17007796	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17007981	0.82[JPT][hapmap]
rs1933881	1.00[JPT][hapmap]
rs28627679	0.85[EUR][1000 genomes]
rs57827085	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs58913447	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58948810	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60807411	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6685446	1.00[JPT][hapmap]
rs7522502	0.86[CHB][hapmap]
rs7530302	0.85[CHB][hapmap];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7553380	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7555789	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556040	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220631600-220636400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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