The 2.0 version of rSNPBase

Variant report

Variant rs7517810
Chromosome Location chr1:172853460-172853461
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172840600-172855200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:172850600-172856800 Enhancers HUVEC blood vessel
3 chr1:172851800-172853600 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr1:172852000-172853600 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr1:172852000-172855600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:172852000-172855600 Enhancers HSMM muscle
7 chr1:172852200-172853600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:172852200-172853600 Enhancers Primary T cells fromperipheralblood blood
9 chr1:172852200-172853800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr1:172852200-172854000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:172852200-172854000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:172852200-172854800 Enhancers Skeletal Muscle Female skeletal muscle
13 chr1:172852200-172855200 Enhancers HSMMtube muscle
14 chr1:172852200-172855400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr1:172852200-172855400 Enhancers Muscle Satellite Cultured Cells --
16 chr1:172852200-172855600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:172852400-172853600 Enhancers Primary B cells from peripheral blood blood
18 chr1:172852400-172853600 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:172852400-172854000 Enhancers Primary hematopoietic stem cells blood
20 chr1:172852400-172854200 Enhancers Primary hematopoietic stem cells short term culture blood
21 chr1:172852400-172855800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr1:172852600-172853600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
23 chr1:172852600-172853800 Enhancers Primary T helper cells PMA-I stimulated --
24 chr1:172852600-172862400 Weak transcription Pancreas Pancrea
25 chr1:172852800-172854600 Weak transcription Right Atrium heart
26 chr1:172852800-172857000 Enhancers Stomach Mucosa stomach
27 chr1:172853000-172854000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:172853200-172854200 Enhancers Dnd41 blood
29 chr1:172853200-172854200 Weak transcription NHDF-Ad bronchial
30 chr1:172853200-172854600 Weak transcription NHLF lung
31 chr1:172853200-172855600 Enhancers Osteobl bone
32 chr1:172853400-172853600 Enhancers Psoas Muscle Psoas
33 chr1:172853400-172853600 Enhancers GM12878-XiMat blood
34 chr1:172853400-172854600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr1:172853400-172855200 Weak transcription Duodenum Mucosa Duodenum
36 chr1:172853400-172855200 Weak transcription NH-A brain

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Last update: Aug 31, 2015