Variant report

Variant	rs7518883
Chromosome Location	chr1:220686566-220686567
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17007839	1.00[ASN][1000 genomes]
rs17007842	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6668644	1.00[AMR][1000 genomes]
rs6669644	1.00[AMR][1000 genomes]
rs6695068	1.00[ASN][1000 genomes]
rs6696723	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73093505	1.00[AMR][1000 genomes]
rs73093521	1.00[AMR][1000 genomes]
rs73093530	1.00[AMR][1000 genomes]
rs73101842	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73101870	1.00[AMR][1000 genomes]
rs7512507	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7518985	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7531134	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7545089	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7550069	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7552147	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7556342	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220683200-220689800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr1:220685200-220689400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr1:220685400-220687000	Weak transcription	Placenta	Placenta
4	chr1:220685600-220687800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr1:220685600-220689000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr1:220685600-220689000	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr1:220685600-220689200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr1:220685800-220686800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr1:220685800-220687400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr1:220685800-220689400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr1:220686000-220687200	Weak transcription	HMEC	breast
12	chr1:220686200-220687200	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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