The 2.0 version of rSNPBase

Variant report

Variant rs7524572
Chromosome Location chr1:220985828-220985829
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:220971200-220986400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr1:220971200-220991400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:220972800-220987600 Weak transcription Fetal Brain Male brain
5 chr1:220973200-220991800 Weak transcription Brain Anterior Caudate brain
6 chr1:220973400-221000200 Weak transcription Placenta Placenta
7 chr1:220974000-220992800 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr1:220974200-220986800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:220974200-220991200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:220975200-220992000 Weak transcription Brain Germinal Matrix brain
11 chr1:220975600-220988000 Weak transcription Brain Angular Gyrus brain
12 chr1:220975600-220991400 Weak transcription Brain Cingulate Gyrus brain
13 chr1:220976400-220988000 Weak transcription Spleen Spleen
14 chr1:220978400-220991200 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:220979400-220989400 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr1:220980400-221001400 Weak transcription Gastric stomach
17 chr1:220980600-220986600 Weak transcription Fetal Brain Female brain
18 chr1:220981000-220987600 Strong transcription Hela-S3 cervix
19 chr1:220981400-220991600 Strong transcription Fetal Intestine Small intestine
20 chr1:220982400-220987200 Weak transcription Brain Substantia Nigra brain
21 chr1:220984000-220989400 Weak transcription Brain Inferior Temporal Lobe brain
22 chr1:220984000-220991600 Weak transcription Small Intestine intestine
23 chr1:220984000-220992200 Weak transcription Esophagus oesophagus
24 chr1:220984000-220997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:220984000-220999800 Weak transcription Colonic Mucosa Colon
26 chr1:220984200-220986400 Weak transcription Pancreas Pancrea
27 chr1:220984200-220986600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr1:220984200-220987600 Strong transcription HepG2 liver
29 chr1:220984200-220988400 Weak transcription Fetal Lung lung
30 chr1:220984200-220989400 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr1:220984200-220990400 Strong transcription Adipose Nuclei Adipose
32 chr1:220984200-220991400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:220984200-220991400 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr1:220984200-220991400 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr1:220984200-220991600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr1:220984200-220991600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:220984200-220991800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:220984200-220992000 Weak transcription Fetal Muscle Trunk muscle
39 chr1:220984200-220992200 Weak transcription Lung lung
40 chr1:220984200-220992400 Weak transcription ES-WA7 Cell Line embryonic stem cell
41 chr1:220984200-220993400 Strong transcription Primary monocytes fromperipheralblood blood
42 chr1:220984200-221001400 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr1:220984400-220987400 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr1:220984600-220989600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:220984600-220999600 Weak transcription Left Ventricle heart
46 chr1:220984600-221006600 Weak transcription Psoas Muscle Psoas
47 chr1:220984800-220988800 Weak transcription Fetal Heart heart
48 chr1:220984800-220991600 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr1:220984800-220993000 Weak transcription Right Ventricle heart
50 chr1:220985000-220988600 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015