Variant report

Variant	rs7528081
Chromosome Location	chr1:71329889-71329890
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1327464	0.88[ASN][1000 genomes]
rs1359835	0.88[ASN][1000 genomes]
rs1409977	0.90[ASN][1000 genomes]
rs17131468	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35755730	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4998697	0.90[ASN][1000 genomes]
rs6424408	0.89[ASN][1000 genomes]
rs6424409	0.91[ASN][1000 genomes]
rs7547606	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845198	chr1:71274759-71514969	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	nsv830148	chr1:71310366-71483932	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71328000-71330800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr1:71328400-71330400	Enhancers	Adipose Nuclei	Adipose
3	chr1:71328400-71331000	Enhancers	NHDF-Ad	bronchial
4	chr1:71329800-71332800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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