Variant report

Variant	rs7529655
Chromosome Location	chr1:216895800-216895801
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10495033	0.84[TSI][hapmap]
rs11572672	0.85[CHD][hapmap];0.82[GIH][hapmap];0.87[TSI][hapmap]
rs12033378	0.81[GIH][hapmap];0.91[TSI][hapmap]
rs12034601	0.84[CHD][hapmap];0.80[TSI][hapmap]
rs12037068	0.81[GIH][hapmap];0.87[TSI][hapmap]
rs1416611	0.82[GIH][hapmap];0.84[TSI][hapmap]
rs1416612	0.89[CHB][hapmap];0.81[CHD][hapmap]
rs17043513	0.80[CEU][hapmap];0.85[CHD][hapmap];0.87[GIH][hapmap];0.91[TSI][hapmap]
rs17043567	0.84[LWK][hapmap]
rs2820884	0.89[CHB][hapmap]
rs4426040	0.89[CHB][hapmap]
rs4846631	0.82[CHB][hapmap];0.81[CHD][hapmap]
rs61819765	0.81[ASN][1000 genomes]
rs72737402	0.82[ASN][1000 genomes]
rs7521774	0.82[CHB][hapmap];0.86[CHD][hapmap];0.90[JPT][hapmap];0.90[LWK][hapmap];0.82[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:216887400-216896400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:216891600-216897400	Active TSS	Right Atrium	heart
3	chr1:216893000-216896600	Active TSS	Fetal Stomach	stomach
4	chr1:216893600-216896600	Active TSS	Right Ventricle	heart
5	chr1:216893800-216897800	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr1:216894000-216897400	Active TSS	Left Ventricle	heart
7	chr1:216894000-216897800	Active TSS	Placenta	Placenta
8	chr1:216894200-216897600	Active TSS	Fetal Heart	heart
9	chr1:216894600-216895800	Bivalent Enhancer	Fetal Brain Male	brain
10	chr1:216894600-216897600	Active TSS	Skeletal Muscle Male	skeletal muscle
11	chr1:216894800-216896000	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr1:216894800-216897400	Active TSS	Rectal Mucosa Donor 29	rectum
13	chr1:216895000-216896000	Active TSS	Brain Germinal Matrix	brain
14	chr1:216895000-216897400	Active TSS	Skeletal Muscle Female	skeletal muscle
15	chr1:216895200-216896000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr1:216895200-216896800	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr1:216895200-216896800	Active TSS	Fetal Intestine Large	intestine
18	chr1:216895200-216897400	Active TSS	Gastric	stomach
19	chr1:216895400-216896000	Weak transcription	Psoas Muscle	Psoas
20	chr1:216895400-216896200	Bivalent Enhancer	Fetal Lung	lung
21	chr1:216895400-216896400	Weak transcription	Lung	lung
22	chr1:216895400-216897600	Active TSS	Duodenum Smooth Muscle	Duodenum
23	chr1:216895400-216897800	Active TSS	Fetal Intestine Small	intestine
24	chr1:216895600-216896000	Active TSS	Duodenum Mucosa	Duodenum
25	chr1:216895600-216896200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr1:216895600-216896400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
27	chr1:216895600-216897400	Active TSS	Rectal Mucosa Donor 31	rectum
28	chr1:216895800-216896400	Active TSS	Fetal Muscle Leg	muscle

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